Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SIMC1Q8NDZ2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 AC134407.2-201ENST00000625089 1978 ntBASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 FAM220BP-201ENST00000377689 816 ntBASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 RBPMS2P1-201ENST00000437762 623 ntBASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 ALG1L8P-201ENST00000533887 760 ntBASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SIMC1Q8NDZ2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 CICP13-201ENST00000422015 2789 ntBASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 AL139400.1-201ENST00000366220 510 ntBASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 SPDYE14P-201ENST00000442619 822 ntBASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 AC023141.5-201ENST00000458585 616 ntBASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 RARRES2P9-201ENST00000565168 469 ntBASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 MIR3197-201ENST00000582241 73 ntBASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 AC009093.7-201ENST00000623853 1223 ntBASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.1■□□□□ 0.01
SIMC1Q8NDZ2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms