Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 AC092580.3-201ENST00000430932 139 ntBASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 IGHV3-42-201ENST00000520410 361 ntBASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 AL079307.3-201ENST00000556114 283 ntBASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 AL390955.2-201ENST00000603032 514 ntBASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC82Q8N4S0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 AC004987.2-201ENST00000395959 1148 ntBASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 CYMP-203ENST00000474680 1263 ntBASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 CETN4P-206ENST00000642099 2168 ntBASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 AP001282.1-201ENST00000531301 1499 ntBASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC82Q8N4S0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 AC073592.8-201ENST00000624126 511 ntBASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 REXO1L1P-202ENST00000608646 1974 ntBASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC82Q8N4S0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms