Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 LRRC59-203ENST00000576448 1531 ntBASIC21.62■■□□□ 1.05
XRN1Q8IZH2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
XRN1Q8IZH2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 GHSR-202ENST00000427970 912 ntBASIC21.61■■□□□ 1.05
XRN1Q8IZH2 EEF1DP6-201ENST00000449232 372 ntBASIC21.61■■□□□ 1.05
XRN1Q8IZH2 CU633904.3-201ENST00000624042 1029 ntBASIC21.61■■□□□ 1.05
XRN1Q8IZH2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
XRN1Q8IZH2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 AL136309.1-201ENST00000403917 691 ntBASIC21.6■■□□□ 1.05
XRN1Q8IZH2 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 CHMP1AP1-201ENST00000445563 662 ntBASIC21.6■■□□□ 1.05
XRN1Q8IZH2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 TUBBP5-203ENST00000508529 1334 ntBASIC21.6■■□□□ 1.05
XRN1Q8IZH2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
XRN1Q8IZH2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 TPM3P8-201ENST00000330554 643 ntBASIC21.59■■□□□ 1.05
XRN1Q8IZH2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 SUPT4H1P2-201ENST00000501248 353 ntBASIC21.59■■□□□ 1.05
XRN1Q8IZH2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 AC116345.2-201ENST00000512837 523 ntBASIC21.59■■□□□ 1.05
XRN1Q8IZH2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
XRN1Q8IZH2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 MAGEA5-201ENST00000446757 942 ntBASIC21.58■■□□□ 1.05
XRN1Q8IZH2 AC100850.1-201ENST00000506768 649 ntBASIC21.58■■□□□ 1.05
XRN1Q8IZH2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 RN7SL774P-201ENST00000577467 290 ntBASIC21.58■■□□□ 1.05
XRN1Q8IZH2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
XRN1Q8IZH2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms