Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 AC079781.3-201ENST00000449110 356 ntBASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 AF238378.1-201ENST00000526806 358 ntBASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 AC006557.2-201ENST00000592985 1240 ntBASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 MTDHP3-201ENST00000594186 672 ntBASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 MTDHP4-201ENST00000600287 670 ntBASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 AL031008.1-201ENST00000619963 541 ntBASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM42Q8IWZ5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 AC090616.6-203ENST00000579186 1945 ntBASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 AC006504.4-201ENST00000592118 1568 ntBASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 ELK2BP-201ENST00000415014 1224 ntBASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRIM42Q8IWZ5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 AL137784.3-201ENST00000623858 2288 ntBASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRIM42Q8IWZ5 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 AL121912.1-201ENST00000603683 238 ntBASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM42Q8IWZ5 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms