Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 AL671277.1-201ENST00000429656 993 ntBASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 RARRES2P8-201ENST00000566335 367 ntBASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 AC092902.6-201ENST00000641783 218 ntBASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A2Q8IWA5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 DNAJB3-201ENST00000446806 729 ntBASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A2Q8IWA5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC44A2Q8IWA5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC44A2Q8IWA5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms