Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 AP003680.1-201ENST00000598970 3660 ntBASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD3Q7Z3D4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 LINC02228-204ENST00000642115 2962 ntBASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 RPL37AP1-201ENST00000412502 279 ntBASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 AL138828.2-201ENST00000615812 383 ntBASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 AC073592.8-201ENST00000624126 511 ntBASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LYSMD3Q7Z3D4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 AC092384.3-202ENST00000564646 2873 ntBASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 KRT8P37-201ENST00000451609 1420 ntBASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 SPDYE17-201ENST00000412399 783 ntBASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 AL080243.2-201ENST00000418783 582 ntBASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 AC092580.3-201ENST00000430932 139 ntBASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 AL365203.3-201ENST00000609742 2057 ntBASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.05■□□□□ 0.16
LYSMD3Q7Z3D4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms