Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP1BQ7LBR1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.85□□□□□ -0.03
CHMP1BQ7LBR1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP1BQ7LBR1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CHMP1BQ7LBR1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP1BQ7LBR1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHMP1BQ7LBR1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CHMP1BQ7LBR1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP1BQ7LBR1 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 RBPMS2P1-201ENST00000437762 623 ntBASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 FAM86GP-201ENST00000448322 971 ntBASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AC069335.1-201ENST00000489972 472 ntBASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AC105233.2-201ENST00000523697 349 ntBASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AF228730.5-201ENST00000530288 346 ntBASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AC009093.7-201ENST00000623853 1223 ntBASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHMP1BQ7LBR1 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CHMP1BQ7LBR1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHMP1BQ7LBR1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHMP1BQ7LBR1 AC092171.3-201ENST00000610122 2651 ntBASIC14.83□□□□□ -0.03
CHMP1BQ7LBR1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHMP1BQ7LBR1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 RNF216P1-203ENST00000404404 2427 ntBASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 HLA-J-203ENST00000494367 1087 ntBASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 PRYP6-201ENST00000514804 343 ntBASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 AP002414.2-201ENST00000591780 3365 ntBASIC14.83□□□□□ -0.04
CHMP1BQ7LBR1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms