Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF44Q7L0R7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 HIST3H2BA-201ENST00000436555 524 ntBASIC15.32■□□□□ 0.04
RNF44Q7L0R7 AL512638.1-201ENST00000457493 794 ntBASIC15.32■□□□□ 0.04
RNF44Q7L0R7 INGX-202ENST00000489074 768 ntBASIC15.32■□□□□ 0.04
RNF44Q7L0R7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.32■□□□□ 0.04
RNF44Q7L0R7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF44Q7L0R7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 MIR6069-201ENST00000620069 79 ntBASIC15.31■□□□□ 0.04
RNF44Q7L0R7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF44Q7L0R7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms