Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 AL136317.3-201ENST00000618497 906 ntBASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 AL136982.4-201ENST00000437689 1740 ntBASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.83■□□□□ 0.6
SYNE3Q6ZMZ3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 KRT18P28-201ENST00000453838 1332 ntBASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 MTND6P24-201ENST00000440466 518 ntBASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 RN7SL828P-201ENST00000607615 303 ntBASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNE3Q6ZMZ3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 AC105917.1-201ENST00000506637 2539 ntBASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 CYP4F24P-201ENST00000586049 1580 ntBASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 Z92544.3-201ENST00000624747 417 ntBASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SYNE3Q6ZMZ3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms