Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD3Q6PCD5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 AL139010.1-201ENST00000454878 894 ntBASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 MIR4745-201ENST00000577608 62 ntBASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD3Q6PCD5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 AC006449.6-201ENST00000612330 2296 ntBASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.66■□□□□ 0.26
RFWD3Q6PCD5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RFWD3Q6PCD5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms