Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC005034.1-201ENST00000426657 489 ntBASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 AC140912.1-201ENST00000577171 1054 ntBASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 PCDHA14-201ENST00000506751 2298 ntBASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
H3F3CQ6NXT2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 AL136379.1-201ENST00000623471 2642 ntBASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
H3F3CQ6NXT2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 RN7SL692P-201ENST00000464677 288 ntBASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 AC099568.2-201ENST00000609194 695 ntBASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 AC005052.1-201ENST00000625181 2492 ntBASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 BNIP3P1-202ENST00000550043 1585 ntBASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
H3F3CQ6NXT2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 AP001282.1-201ENST00000531301 1499 ntBASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
H3F3CQ6NXT2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms