Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC026748.1-201ENST00000624349 3251 ntBASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 AGAP7P-201ENST00000582299 2062 ntBASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 AGAP14-201ENST00000624701 2060 ntBASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 WASH6P-202ENST00000359512 1437 ntBASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 RPS2P1-201ENST00000434010 821 ntBASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 KRT18P34-201ENST00000488218 1270 ntBASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 AC091304.2-201ENST00000564639 760 ntBASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 AC093458.2-201ENST00000623150 629 ntBASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC00242Q5T6M2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 AC009090.5-201ENST00000624886 2285 ntBASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC00242Q5T6M2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 AC013726.1-201ENST00000563747 2285 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 TSPY19P-201ENST00000418461 509 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 AC026396.1-201ENST00000419388 421 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 TSPY18P-201ENST00000441642 509 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 FAM210CP-201ENST00000445714 574 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 SAPCD2P3-201ENST00000455031 850 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 CXCL1P1-201ENST00000502804 216 ntBASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC00242Q5T6M2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms