Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 AL079307.3-201ENST00000556114 283 ntBASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 KRT8P12-202ENST00000472924 1397 ntBASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CBWD3Q5JTY5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 AC126177.1-201ENST00000547829 2218 ntBASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 AL607033.1-201ENST00000623900 1599 ntBASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 AL080243.2-201ENST00000418783 582 ntBASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CBWD3Q5JTY5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CBWD3Q5JTY5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CBWD3Q5JTY5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CBWD3Q5JTY5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.21■□□□□ 0.34
CBWD3Q5JTY5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.21■□□□□ 0.34
CBWD3Q5JTY5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CBWD3Q5JTY5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 AC144831.1-201ENST00000573312 2656 ntBASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 AC093028.1-201ENST00000622998 982 ntBASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CBWD3Q5JTY5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms