Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.56■□□□□ 0.56
CERKLQ49MI3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.56■□□□□ 0.56
CERKLQ49MI3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.56■□□□□ 0.56
CERKLQ49MI3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.56■□□□□ 0.56
CERKLQ49MI3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.56■□□□□ 0.56
CERKLQ49MI3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CERKLQ49MI3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CERKLQ49MI3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CERKLQ49MI3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 RPL13AP25-201ENST00000484130 612 ntBASIC18.55■□□□□ 0.56
CERKLQ49MI3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 BTNL10-201ENST00000595971 695 ntBASIC18.55■□□□□ 0.56
CERKLQ49MI3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.55■□□□□ 0.56
CERKLQ49MI3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CERKLQ49MI3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 INTS4P2-202ENST00000614726 2019 ntBASIC18.54■□□□□ 0.56
CERKLQ49MI3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 AC234783.1-201ENST00000441761 496 ntBASIC18.54■□□□□ 0.56
CERKLQ49MI3 USP32P1-208ENST00000506594 1164 ntBASIC18.54■□□□□ 0.56
CERKLQ49MI3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 AL049840.4-201ENST00000602422 811 ntBASIC18.54■□□□□ 0.56
CERKLQ49MI3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CERKLQ49MI3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.54■□□□□ 0.56
CERKLQ49MI3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms