Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 RRP7BP-205ENST00000566851 833 ntBASIC19.15■□□□□ 0.66
RFX7Q2KHR2 AC132938.2-201ENST00000579188 680 ntBASIC19.15■□□□□ 0.66
RFX7Q2KHR2 CTBP2P3-201ENST00000585629 1255 ntBASIC19.15■□□□□ 0.66
RFX7Q2KHR2 AL591163.1-201ENST00000641757 987 ntBASIC19.15■□□□□ 0.66
RFX7Q2KHR2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX7Q2KHR2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.66
RFX7Q2KHR2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFX7Q2KHR2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFX7Q2KHR2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFX7Q2KHR2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 RN7SL837P-201ENST00000463010 287 ntBASIC19.14■□□□□ 0.65
RFX7Q2KHR2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 AC093726.1-201ENST00000608064 963 ntBASIC19.14■□□□□ 0.65
RFX7Q2KHR2 RPSAP52-203ENST00000622976 1023 ntBASIC19.14■□□□□ 0.65
RFX7Q2KHR2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX7Q2KHR2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 SLED1-202ENST00000512051 380 ntBASIC19.13■□□□□ 0.65
RFX7Q2KHR2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.13■□□□□ 0.65
RFX7Q2KHR2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RFX7Q2KHR2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 TMEM14DP-201ENST00000422205 345 ntBASIC19.12■□□□□ 0.65
RFX7Q2KHR2 MEP1AP4-201ENST00000423244 1087 ntBASIC19.12■□□□□ 0.65
RFX7Q2KHR2 RPL13P2-201ENST00000440687 659 ntBASIC19.12■□□□□ 0.65
RFX7Q2KHR2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 HILS1-202ENST00000545329 423 ntBASIC19.12■□□□□ 0.65
RFX7Q2KHR2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 AC123567.1-201ENST00000548294 1261 ntBASIC19.12■□□□□ 0.65
RFX7Q2KHR2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RFX7Q2KHR2 LINC01115-203ENST00000606068 577 ntBASIC19.12■□□□□ 0.65
RFX7Q2KHR2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms