Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH17Q12864 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.14■□□□□ 0.17
CDH17Q12864 AL353705.2-201ENST00000428243 662 ntBASIC16.14■□□□□ 0.17
CDH17Q12864 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.14■□□□□ 0.17
CDH17Q12864 EEF1DP4-201ENST00000446006 880 ntBASIC16.14■□□□□ 0.17
CDH17Q12864 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 AC112482.1-201ENST00000492080 688 ntBASIC16.14■□□□□ 0.17
CDH17Q12864 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CDH17Q12864 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH17Q12864 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.14■□□□□ 0.17
CDH17Q12864 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
CDH17Q12864 AC010327.4-202ENST00000591484 748 ntBASIC16.14■□□□□ 0.17
CDH17Q12864 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.14■□□□□ 0.17
CDH17Q12864 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDH17Q12864 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDH17Q12864 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CDH17Q12864 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH17Q12864 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDH17Q12864 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDH17Q12864 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDH17Q12864 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDH17Q12864 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDH17Q12864 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH17Q12864 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.13■□□□□ 0.17
CDH17Q12864 RPSAP43-201ENST00000402237 625 ntBASIC16.13■□□□□ 0.17
CDH17Q12864 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 FAM58DP-201ENST00000428076 619 ntBASIC16.13■□□□□ 0.17
CDH17Q12864 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH17Q12864 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.13■□□□□ 0.17
CDH17Q12864 AL450472.2-201ENST00000603663 1156 ntBASIC16.13■□□□□ 0.17
CDH17Q12864 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH17Q12864 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH17Q12864 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
CDH17Q12864 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 TMBIM7P-203ENST00000641617 1718 ntBASIC16.13■□□□□ 0.17
CDH17Q12864 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.13■□□□□ 0.17
CDH17Q12864 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.13■□□□□ 0.17
CDH17Q12864 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDH17Q12864 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH17Q12864 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDH17Q12864 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH17Q12864 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH17Q12864 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDH17Q12864 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH17Q12864 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH17Q12864 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH17Q12864 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH17Q12864 AC136621.1-201ENST00000624017 2304 ntBASIC16.12■□□□□ 0.17
CDH17Q12864 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.12■□□□□ 0.17
CDH17Q12864 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDH17Q12864 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH17Q12864 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDH17Q12864 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CDH17Q12864 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH17Q12864 UPF3AP3-201ENST00000420996 769 ntBASIC16.12■□□□□ 0.17
CDH17Q12864 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.12■□□□□ 0.17
CDH17Q12864 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH17Q12864 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH17Q12864 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.12■□□□□ 0.17
CDH17Q12864 AC093520.2-201ENST00000561830 333 ntBASIC16.12■□□□□ 0.17
CDH17Q12864 AC004835.2-201ENST00000603762 682 ntBASIC16.12■□□□□ 0.17
CDH17Q12864 AC018529.1-201ENST00000613063 361 ntBASIC16.12■□□□□ 0.17
CDH17Q12864 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.12■□□□□ 0.17
CDH17Q12864 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.12■□□□□ 0.17
CDH17Q12864 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms