Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.54■□□□□ 0.72
DDR1Q08345 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.54■□□□□ 0.72
DDR1Q08345 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.54■□□□□ 0.72
DDR1Q08345 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.54■□□□□ 0.72
DDR1Q08345 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.54■□□□□ 0.72
DDR1Q08345 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.54■□□□□ 0.72
DDR1Q08345 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.54■□□□□ 0.72
DDR1Q08345 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.54■□□□□ 0.72
DDR1Q08345 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.54■□□□□ 0.72
DDR1Q08345 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
DDR1Q08345 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
DDR1Q08345 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
DDR1Q08345 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDR1Q08345 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.53■□□□□ 0.72
DDR1Q08345 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
DDR1Q08345 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
DDR1Q08345 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
DDR1Q08345 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.53■□□□□ 0.72
DDR1Q08345 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.53■□□□□ 0.72
DDR1Q08345 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 RNU1-114P-201ENST00000365297 166 ntBASIC19.53■□□□□ 0.72
DDR1Q08345 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.53■□□□□ 0.72
DDR1Q08345 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.53■□□□□ 0.72
DDR1Q08345 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.53■□□□□ 0.72
DDR1Q08345 RN7SL769P-201ENST00000469386 295 ntBASIC19.53■□□□□ 0.72
DDR1Q08345 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
DDR1Q08345 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.53■□□□□ 0.72
DDR1Q08345 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.53■□□□□ 0.72
DDR1Q08345 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.53■□□□□ 0.72
DDR1Q08345 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.53■□□□□ 0.72
DDR1Q08345 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.53■□□□□ 0.72
DDR1Q08345 U62317.3-201ENST00000608319 855 ntBASIC19.53■□□□□ 0.72
DDR1Q08345 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 AL023775.1-201ENST00000454907 1746 ntBASIC19.53■□□□□ 0.72
DDR1Q08345 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.53■□□□□ 0.72
DDR1Q08345 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.53■□□□□ 0.72
DDR1Q08345 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.53■□□□□ 0.72
DDR1Q08345 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DDR1Q08345 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
DDR1Q08345 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.52■□□□□ 0.72
DDR1Q08345 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.52■□□□□ 0.72
DDR1Q08345 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
DDR1Q08345 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
DDR1Q08345 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.52■□□□□ 0.72
DDR1Q08345 AC016700.1-201ENST00000429424 312 ntBASIC19.52■□□□□ 0.72
DDR1Q08345 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.52■□□□□ 0.72
DDR1Q08345 POM121L10P-201ENST00000436994 1285 ntBASIC19.52■□□□□ 0.72
DDR1Q08345 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
DDR1Q08345 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.52■□□□□ 0.72
DDR1Q08345 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
DDR1Q08345 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.52■□□□□ 0.72
DDR1Q08345 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.52■□□□□ 0.72
DDR1Q08345 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.52■□□□□ 0.72
DDR1Q08345 NDUFV2P1-201ENST00000596415 907 ntBASIC19.52■□□□□ 0.72
DDR1Q08345 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.52■□□□□ 0.72
DDR1Q08345 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
DDR1Q08345 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDR1Q08345 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
DDR1Q08345 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.52■□□□□ 0.71
DDR1Q08345 AC012313.1-201ENST00000593393 3059 ntBASIC19.52■□□□□ 0.71
DDR1Q08345 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
DDR1Q08345 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
DDR1Q08345 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.51■□□□□ 0.71
DDR1Q08345 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.51■□□□□ 0.71
DDR1Q08345 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
DDR1Q08345 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDR1Q08345 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms