Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.04■□□□□ 0.32
CDR2Q01850 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDR2Q01850 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDR2Q01850 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDR2Q01850 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CDR2Q01850 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.04■□□□□ 0.32
CDR2Q01850 KRT18P32-201ENST00000424695 1287 ntBASIC17.04■□□□□ 0.32
CDR2Q01850 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.04■□□□□ 0.32
CDR2Q01850 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDR2Q01850 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.04■□□□□ 0.32
CDR2Q01850 EEF1DP4-201ENST00000446006 880 ntBASIC17.04■□□□□ 0.32
CDR2Q01850 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.04■□□□□ 0.32
CDR2Q01850 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.04■□□□□ 0.32
CDR2Q01850 ALG1L8P-201ENST00000533887 760 ntBASIC17.04■□□□□ 0.32
CDR2Q01850 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.04■□□□□ 0.32
CDR2Q01850 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.04■□□□□ 0.32
CDR2Q01850 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
CDR2Q01850 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDR2Q01850 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.04■□□□□ 0.32
CDR2Q01850 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
CDR2Q01850 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CDR2Q01850 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 KRT8P37-201ENST00000451609 1420 ntBASIC17.04■□□□□ 0.32
CDR2Q01850 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDR2Q01850 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDR2Q01850 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.03■□□□□ 0.32
CDR2Q01850 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.03■□□□□ 0.32
CDR2Q01850 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.03■□□□□ 0.32
CDR2Q01850 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDR2Q01850 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.03■□□□□ 0.32
CDR2Q01850 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.03■□□□□ 0.32
CDR2Q01850 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.03■□□□□ 0.32
CDR2Q01850 UPF3AP3-201ENST00000420996 769 ntBASIC17.03■□□□□ 0.32
CDR2Q01850 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.03■□□□□ 0.32
CDR2Q01850 AP000344.2-201ENST00000512987 629 ntBASIC17.03■□□□□ 0.32
CDR2Q01850 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.03■□□□□ 0.32
CDR2Q01850 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.03■□□□□ 0.32
CDR2Q01850 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 MIR4313-201ENST00000580760 101 ntBASIC17.03■□□□□ 0.32
CDR2Q01850 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.03■□□□□ 0.32
CDR2Q01850 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CDR2Q01850 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDR2Q01850 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.03■□□□□ 0.32
CDR2Q01850 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.03■□□□□ 0.32
CDR2Q01850 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDR2Q01850 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDR2Q01850 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.03■□□□□ 0.32
CDR2Q01850 SSR4P1-203ENST00000599569 2260 ntBASIC17.03■□□□□ 0.32
CDR2Q01850 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDR2Q01850 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDR2Q01850 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.02■□□□□ 0.32
CDR2Q01850 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDR2Q01850 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CDR2Q01850 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.02■□□□□ 0.32
CDR2Q01850 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDR2Q01850 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CDR2Q01850 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.02■□□□□ 0.32
CDR2Q01850 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms