Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.61■□□□□ 0.57
IRX3P78415 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX3P78415 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
IRX3P78415 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX3P78415 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.61■□□□□ 0.57
IRX3P78415 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX3P78415 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
IRX3P78415 AP005482.1-201ENST00000563722 1273 ntBASIC18.61■□□□□ 0.57
IRX3P78415 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 AC008735.3-201ENST00000596646 500 ntBASIC18.61■□□□□ 0.57
IRX3P78415 AC133552.6-201ENST00000613406 534 ntBASIC18.61■□□□□ 0.57
IRX3P78415 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
IRX3P78415 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
IRX3P78415 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
IRX3P78415 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX3P78415 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX3P78415 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.61■□□□□ 0.57
IRX3P78415 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX3P78415 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX3P78415 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 AC008741.2-201ENST00000612792 3115 ntBASIC18.6■□□□□ 0.57
IRX3P78415 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.6■□□□□ 0.57
IRX3P78415 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
IRX3P78415 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.6■□□□□ 0.57
IRX3P78415 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.6■□□□□ 0.57
IRX3P78415 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.6■□□□□ 0.57
IRX3P78415 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.6■□□□□ 0.57
IRX3P78415 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
IRX3P78415 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.6■□□□□ 0.57
IRX3P78415 AC092552.1-201ENST00000547243 906 ntBASIC18.6■□□□□ 0.57
IRX3P78415 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.6■□□□□ 0.57
IRX3P78415 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IRX3P78415 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.6■□□□□ 0.57
IRX3P78415 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
IRX3P78415 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX3P78415 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
IRX3P78415 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IRX3P78415 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IRX3P78415 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
IRX3P78415 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IRX3P78415 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IRX3P78415 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.59■□□□□ 0.57
IRX3P78415 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.59■□□□□ 0.57
IRX3P78415 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 KRT223P-202ENST00000449164 1292 ntBASIC18.59■□□□□ 0.57
IRX3P78415 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.59■□□□□ 0.57
IRX3P78415 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.59■□□□□ 0.57
IRX3P78415 MIR4259-201ENST00000584466 101 ntBASIC18.59■□□□□ 0.57
IRX3P78415 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.59■□□□□ 0.57
IRX3P78415 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.59■□□□□ 0.57
IRX3P78415 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
IRX3P78415 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms