Protein–RNA interactions for Protein: P62273

RPS29, 40S ribosomal protein S29, humanhuman

Known RBP Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P62273 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
RPS29P62273 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RPS29P62273 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
RPS29P62273 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC9.04□□□□□ -0.96
RPS29P62273 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RPS29P62273 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RPS29P62273 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RPS29P62273 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RPS29P62273 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
RPS29P62273 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
RPS29P62273 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
RPS29P62273 TK1-203ENST00000588734 1681 ntTSL 2 BASIC9.04□□□□□ -0.96
RPS29P62273 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC9.04□□□□□ -0.96
RPS29P62273 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RPS29P62273 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 AL607033.1-201ENST00000623900 1599 ntBASIC9.03□□□□□ -0.96
RPS29P62273 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC9.03□□□□□ -0.96
RPS29P62273 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RPS29P62273 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC9.03□□□□□ -0.96
RPS29P62273 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC9.03□□□□□ -0.96
RPS29P62273 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC9.03□□□□□ -0.96
RPS29P62273 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC9.03□□□□□ -0.96
RPS29P62273 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC9.03□□□□□ -0.96
RPS29P62273 FAM207CP-201ENST00000443486 507 ntBASIC9.03□□□□□ -0.96
RPS29P62273 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC9.03□□□□□ -0.96
RPS29P62273 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC9.03□□□□□ -0.96
RPS29P62273 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 AC004890.2-204ENST00000481968 304 ntBASIC9.03□□□□□ -0.96
RPS29P62273 RPL13AP25-201ENST00000484130 612 ntBASIC9.03□□□□□ -0.96
RPS29P62273 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
RPS29P62273 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC9.03□□□□□ -0.96
RPS29P62273 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
RPS29P62273 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 AC093512.1-201ENST00000617969 520 ntBASIC9.03□□□□□ -0.96
RPS29P62273 AC004461.2-201ENST00000629517 803 ntBASIC9.03□□□□□ -0.96
RPS29P62273 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RPS29P62273 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC9.03□□□□□ -0.96
RPS29P62273 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
RPS29P62273 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC9.03□□□□□ -0.96
RPS29P62273 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.03□□□□□ -0.96
RPS29P62273 TKT-202ENST00000423516 2075 ntTSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC9.03□□□□□ -0.96
RPS29P62273 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 PCDHA1-201ENST00000378133 2726 ntBASIC9.03□□□□□ -0.96
RPS29P62273 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RPS29P62273 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC9.03□□□□□ -0.96
RPS29P62273 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
RPS29P62273 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
RPS29P62273 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
RPS29P62273 AC020658.6-201ENST00000623564 1870 ntBASIC9.02□□□□□ -0.96
RPS29P62273 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
RPS29P62273 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
RPS29P62273 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
RPS29P62273 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RPS29P62273 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RPS29P62273 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RPS29P62273 AL391825.1-201ENST00000457671 1364 ntBASIC9.02□□□□□ -0.97
RPS29P62273 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.02□□□□□ -0.97
RPS29P62273 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
RPS29P62273 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RPS29P62273 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RPS29P62273 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RPS29P62273 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
RPS29P62273 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
RPS29P62273 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC9.02□□□□□ -0.97
RPS29P62273 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms