Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.3□□□□□ -0.6
CKS1BP61024 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CKS1BP61024 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CKS1BP61024 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.3□□□□□ -0.6
CKS1BP61024 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.3□□□□□ -0.6
CKS1BP61024 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.3□□□□□ -0.6
CKS1BP61024 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.3□□□□□ -0.6
CKS1BP61024 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.3□□□□□ -0.6
CKS1BP61024 AC005336.2-201ENST00000593183 939 ntBASIC11.3□□□□□ -0.6
CKS1BP61024 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 HYMAI.1-201ENST00000620949 238 ntBASIC11.3□□□□□ -0.6
CKS1BP61024 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 HSPA7-201ENST00000445535 1927 ntBASIC11.3□□□□□ -0.6
CKS1BP61024 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 AC132938.5-201ENST00000624980 1813 ntBASIC11.3□□□□□ -0.6
CKS1BP61024 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS1BP61024 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
CKS1BP61024 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS1BP61024 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
CKS1BP61024 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
CKS1BP61024 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.29□□□□□ -0.6
CKS1BP61024 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 MINOS1P3-201ENST00000457048 203 ntBASIC11.29□□□□□ -0.6
CKS1BP61024 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.29□□□□□ -0.6
CKS1BP61024 KRT8P26-201ENST00000534154 1276 ntBASIC11.29□□□□□ -0.6
CKS1BP61024 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.29□□□□□ -0.6
CKS1BP61024 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.29□□□□□ -0.6
CKS1BP61024 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.29□□□□□ -0.6
CKS1BP61024 AL353801.3-201ENST00000609898 542 ntBASIC11.29□□□□□ -0.6
CKS1BP61024 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CKS1BP61024 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CKS1BP61024 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS1BP61024 ALOX12P2-203ENST00000570921 1945 ntBASIC11.29□□□□□ -0.6
CKS1BP61024 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms