Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH4P55283 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 AC010491.1-201ENST00000563101 2797 ntBASIC16.27■□□□□ 0.2
CDH4P55283 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDH4P55283 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
CDH4P55283 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH4P55283 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH4P55283 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 AL607033.1-201ENST00000623900 1599 ntBASIC16.27■□□□□ 0.2
CDH4P55283 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH4P55283 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.27■□□□□ 0.2
CDH4P55283 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 RPL13P2-201ENST00000440687 659 ntBASIC16.27■□□□□ 0.2
CDH4P55283 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH4P55283 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH4P55283 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH4P55283 AC138761.1-201ENST00000584393 385 ntBASIC16.27■□□□□ 0.2
CDH4P55283 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.27■□□□□ 0.2
CDH4P55283 LINC01115-203ENST00000606068 577 ntBASIC16.27■□□□□ 0.2
CDH4P55283 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH4P55283 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.27■□□□□ 0.19
CDH4P55283 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH4P55283 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH4P55283 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH4P55283 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH4P55283 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH4P55283 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDH4P55283 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CDH4P55283 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH4P55283 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH4P55283 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDH4P55283 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH4P55283 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH4P55283 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH4P55283 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.26■□□□□ 0.19
CDH4P55283 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH4P55283 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CDH4P55283 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH4P55283 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CDH4P55283 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDH4P55283 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH4P55283 MIR4313-201ENST00000580760 101 ntBASIC16.26■□□□□ 0.19
CDH4P55283 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH4P55283 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH4P55283 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH4P55283 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH4P55283 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH4P55283 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH4P55283 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH4P55283 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH4P55283 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH4P55283 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH4P55283 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 SPDYE19P-201ENST00000338590 713 ntBASIC16.25■□□□□ 0.19
CDH4P55283 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH4P55283 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 PIN1P1-201ENST00000412108 996 ntBASIC16.25■□□□□ 0.19
CDH4P55283 GNAQP1-201ENST00000444815 1067 ntBASIC16.25■□□□□ 0.19
CDH4P55283 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH4P55283 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 SLED1-202ENST00000512051 380 ntBASIC16.25■□□□□ 0.19
CDH4P55283 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH4P55283 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH4P55283 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH4P55283 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH4P55283 AC004790.1-201ENST00000612686 536 ntBASIC16.25■□□□□ 0.19
CDH4P55283 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH4P55283 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms