Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.13■□□□□ 0.33
VCPP55072 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.12■□□□□ 0.33
VCPP55072 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VCPP55072 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VCPP55072 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.12■□□□□ 0.33
VCPP55072 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.12■□□□□ 0.33
VCPP55072 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.12■□□□□ 0.33
VCPP55072 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.12■□□□□ 0.33
VCPP55072 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.12■□□□□ 0.33
VCPP55072 HLA-V-204ENST00000476601 1289 ntBASIC17.12■□□□□ 0.33
VCPP55072 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.12■□□□□ 0.33
VCPP55072 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 AC011495.1-201ENST00000498085 584 ntBASIC17.12■□□□□ 0.33
VCPP55072 AC119751.2-201ENST00000504529 210 ntBASIC17.12■□□□□ 0.33
VCPP55072 MIR4538-201ENST00000581377 78 ntBASIC17.12■□□□□ 0.33
VCPP55072 AC004840.1-201ENST00000636359 365 ntBASIC17.12■□□□□ 0.33
VCPP55072 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
VCPP55072 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VCPP55072 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCPP55072 REXO1L8P-201ENST00000604378 1897 ntBASIC17.12■□□□□ 0.33
VCPP55072 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.12■□□□□ 0.33
VCPP55072 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
VCPP55072 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.11■□□□□ 0.33
VCPP55072 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.11■□□□□ 0.33
VCPP55072 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.11■□□□□ 0.33
VCPP55072 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
VCPP55072 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.11■□□□□ 0.33
VCPP55072 HAUS4P1-201ENST00000406739 1145 ntBASIC17.11■□□□□ 0.33
VCPP55072 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.11■□□□□ 0.33
VCPP55072 KRT18P34-201ENST00000488218 1270 ntBASIC17.11■□□□□ 0.33
VCPP55072 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.11■□□□□ 0.33
VCPP55072 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.11■□□□□ 0.33
VCPP55072 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.11■□□□□ 0.33
VCPP55072 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
VCPP55072 AC008494.3-201ENST00000606615 944 ntBASIC17.11■□□□□ 0.33
VCPP55072 GPR182-203ENST00000622922 591 ntBASIC17.11■□□□□ 0.33
VCPP55072 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.11■□□□□ 0.33
VCPP55072 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 PAUPAR-201ENST00000630360 2965 ntBASIC17.11■□□□□ 0.33
VCPP55072 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
VCPP55072 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VCPP55072 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCPP55072 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.1■□□□□ 0.33
VCPP55072 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCPP55072 PKD1P5-201ENST00000532415 10291 ntBASIC17.1■□□□□ 0.33
VCPP55072 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VCPP55072 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.1■□□□□ 0.33
VCPP55072 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCPP55072 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCPP55072 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.1■□□□□ 0.33
VCPP55072 AC105917.1-201ENST00000506637 2539 ntBASIC17.1■□□□□ 0.33
VCPP55072 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VCPP55072 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VCPP55072 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.1■□□□□ 0.33
VCPP55072 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCPP55072 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCPP55072 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.1■□□□□ 0.33
VCPP55072 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCPP55072 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.1■□□□□ 0.33
VCPP55072 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.1■□□□□ 0.33
VCPP55072 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.1■□□□□ 0.33
VCPP55072 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCPP55072 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.1■□□□□ 0.33
VCPP55072 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.1■□□□□ 0.33
VCPP55072 TMEM261P1-201ENST00000604899 340 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms