Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 AL355864.2-201ENST00000447420 863 ntBASIC15.73■□□□□ 0.11
LIMK1P53667 IGHJ2P-201ENST00000454480 60 ntBASIC15.73■□□□□ 0.11
LIMK1P53667 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.73■□□□□ 0.11
LIMK1P53667 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.73■□□□□ 0.11
LIMK1P53667 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LIMK1P53667 AL022328.3-201ENST00000607943 679 ntBASIC15.73■□□□□ 0.11
LIMK1P53667 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.73■□□□□ 0.11
LIMK1P53667 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
LIMK1P53667 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LIMK1P53667 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LIMK1P53667 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LIMK1P53667 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.72■□□□□ 0.11
LIMK1P53667 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 AC008741.2-201ENST00000612792 3115 ntBASIC15.72■□□□□ 0.11
LIMK1P53667 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.72■□□□□ 0.11
LIMK1P53667 SLC25A1P3-201ENST00000395415 828 ntBASIC15.72■□□□□ 0.11
LIMK1P53667 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LIMK1P53667 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.72■□□□□ 0.11
LIMK1P53667 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.72■□□□□ 0.11
LIMK1P53667 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.72■□□□□ 0.11
LIMK1P53667 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.72■□□□□ 0.11
LIMK1P53667 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.72■□□□□ 0.11
LIMK1P53667 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LIMK1P53667 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.72■□□□□ 0.11
LIMK1P53667 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.72■□□□□ 0.11
LIMK1P53667 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.72■□□□□ 0.11
LIMK1P53667 AC020765.3-201ENST00000613051 740 ntBASIC15.72■□□□□ 0.11
LIMK1P53667 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LIMK1P53667 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LIMK1P53667 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.72■□□□□ 0.11
LIMK1P53667 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
LIMK1P53667 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LIMK1P53667 AC092171.3-201ENST00000610122 2651 ntBASIC15.71■□□□□ 0.11
LIMK1P53667 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LIMK1P53667 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.71■□□□□ 0.11
LIMK1P53667 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LIMK1P53667 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LIMK1P53667 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.71■□□□□ 0.11
LIMK1P53667 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LIMK1P53667 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LIMK1P53667 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.71■□□□□ 0.11
LIMK1P53667 AC079328.1-201ENST00000560358 952 ntBASIC15.71■□□□□ 0.11
LIMK1P53667 AL118558.3-201ENST00000607414 1079 ntBASIC15.71■□□□□ 0.11
LIMK1P53667 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.71■□□□□ 0.11
LIMK1P53667 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.71■□□□□ 0.11
LIMK1P53667 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.71■□□□□ 0.11
LIMK1P53667 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.71■□□□□ 0.11
LIMK1P53667 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms