Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
USP11P51784 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.98■□□□□ 0.47
USP11P51784 LINC01115-203ENST00000606068 577 ntBASIC17.98■□□□□ 0.47
USP11P51784 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.98■□□□□ 0.47
USP11P51784 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.98■□□□□ 0.47
USP11P51784 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.98■□□□□ 0.47
USP11P51784 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.98■□□□□ 0.47
USP11P51784 AC008761.3-201ENST00000624803 892 ntBASIC17.98■□□□□ 0.47
USP11P51784 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
USP11P51784 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.98■□□□□ 0.47
USP11P51784 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.98■□□□□ 0.47
USP11P51784 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
USP11P51784 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
USP11P51784 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
USP11P51784 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
USP11P51784 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.98■□□□□ 0.47
USP11P51784 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.98■□□□□ 0.47
USP11P51784 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.98■□□□□ 0.47
USP11P51784 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
USP11P51784 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
USP11P51784 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
USP11P51784 AC008894.3-201ENST00000624324 3103 ntBASIC17.97■□□□□ 0.47
USP11P51784 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
USP11P51784 TOMM22P5-201ENST00000416399 439 ntBASIC17.97■□□□□ 0.47
USP11P51784 AC002472.2-201ENST00000442739 958 ntBASIC17.97■□□□□ 0.47
USP11P51784 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.97■□□□□ 0.47
USP11P51784 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.97■□□□□ 0.47
USP11P51784 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 SERBP1P5-201ENST00000510079 1181 ntBASIC17.97■□□□□ 0.47
USP11P51784 TIMM17BP1-201ENST00000545713 516 ntBASIC17.97■□□□□ 0.47
USP11P51784 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.97■□□□□ 0.47
USP11P51784 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.97■□□□□ 0.47
USP11P51784 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
USP11P51784 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP11P51784 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
USP11P51784 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.96■□□□□ 0.47
USP11P51784 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.96■□□□□ 0.47
USP11P51784 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
USP11P51784 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
USP11P51784 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.96■□□□□ 0.47
USP11P51784 AC236430.1-201ENST00000402231 743 ntBASIC17.96■□□□□ 0.47
USP11P51784 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.96■□□□□ 0.47
USP11P51784 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.96■□□□□ 0.47
USP11P51784 SPDYE18-201ENST00000510091 1050 ntBASIC17.96■□□□□ 0.47
USP11P51784 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.96■□□□□ 0.47
USP11P51784 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.96■□□□□ 0.47
USP11P51784 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.96■□□□□ 0.47
USP11P51784 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
USP11P51784 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.96■□□□□ 0.47
USP11P51784 AF228730.6-201ENST00000641497 218 ntBASIC17.96■□□□□ 0.47
USP11P51784 AC084121.3-201ENST00000641716 218 ntBASIC17.96■□□□□ 0.47
USP11P51784 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.96■□□□□ 0.47
USP11P51784 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.96■□□□□ 0.47
USP11P51784 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP11P51784 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
USP11P51784 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
USP11P51784 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
USP11P51784 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
USP11P51784 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 AC007950.2-201ENST00000615045 2347 ntBASIC17.95■□□□□ 0.46
USP11P51784 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP11P51784 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms