Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
GPC3P51654 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GPC3P51654 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GPC3P51654 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.59■□□□□ 0.41
GPC3P51654 AC024909.3-201ENST00000611513 2257 ntBASIC17.59■□□□□ 0.41
GPC3P51654 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
GPC3P51654 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.59■□□□□ 0.41
GPC3P51654 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
GPC3P51654 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.59■□□□□ 0.41
GPC3P51654 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC3P51654 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GPC3P51654 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
GPC3P51654 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC3P51654 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC3P51654 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC3P51654 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.58■□□□□ 0.41
GPC3P51654 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GPC3P51654 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC3P51654 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GPC3P51654 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC3P51654 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
GPC3P51654 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.58■□□□□ 0.41
GPC3P51654 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GPC3P51654 AC138969.3-201ENST00000546612 1459 ntBASIC17.58■□□□□ 0.41
GPC3P51654 AC138932.2-201ENST00000548268 1459 ntBASIC17.58■□□□□ 0.41
GPC3P51654 AC126755.4-201ENST00000549796 1459 ntBASIC17.58■□□□□ 0.41
GPC3P51654 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC3P51654 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.58■□□□□ 0.41
GPC3P51654 CU639417.3-201ENST00000624240 1404 ntBASIC17.58■□□□□ 0.41
GPC3P51654 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
GPC3P51654 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
GPC3P51654 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
GPC3P51654 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC3P51654 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.58■□□□□ 0.4
GPC3P51654 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC3P51654 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.58■□□□□ 0.4
GPC3P51654 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
GPC3P51654 HAUS4P1-201ENST00000406739 1145 ntBASIC17.58■□□□□ 0.4
GPC3P51654 MEP1AP4-201ENST00000423244 1087 ntBASIC17.58■□□□□ 0.4
GPC3P51654 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.58■□□□□ 0.4
GPC3P51654 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.58■□□□□ 0.4
GPC3P51654 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.58■□□□□ 0.4
GPC3P51654 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.58■□□□□ 0.4
GPC3P51654 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.58■□□□□ 0.4
GPC3P51654 AC099568.2-201ENST00000609194 695 ntBASIC17.58■□□□□ 0.4
GPC3P51654 AC007431.3-201ENST00000623221 587 ntBASIC17.58■□□□□ 0.4
GPC3P51654 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC3P51654 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
GPC3P51654 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.58■□□□□ 0.4
GPC3P51654 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
GPC3P51654 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC3P51654 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.58■□□□□ 0.4
GPC3P51654 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.58■□□□□ 0.4
GPC3P51654 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.58■□□□□ 0.4
GPC3P51654 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
GPC3P51654 AP001282.1-201ENST00000531301 1499 ntBASIC17.57■□□□□ 0.4
GPC3P51654 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.57■□□□□ 0.4
GPC3P51654 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.57■□□□□ 0.4
GPC3P51654 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
GPC3P51654 LINC01115-203ENST00000606068 577 ntBASIC17.57■□□□□ 0.4
GPC3P51654 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.57■□□□□ 0.4
GPC3P51654 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 AL365203.3-201ENST00000609742 2057 ntBASIC17.57■□□□□ 0.4
GPC3P51654 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC3P51654 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC3P51654 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms