Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NEDD4P46934 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NEDD4P46934 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEDD4P46934 AC236430.1-201ENST00000402231 743 ntBASIC18.73■□□□□ 0.59
NEDD4P46934 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.73■□□□□ 0.59
NEDD4P46934 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.73■□□□□ 0.59
NEDD4P46934 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.73■□□□□ 0.59
NEDD4P46934 TSPY16P-201ENST00000449843 468 ntBASIC18.73■□□□□ 0.59
NEDD4P46934 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.73■□□□□ 0.59
NEDD4P46934 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.73■□□□□ 0.59
NEDD4P46934 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.73■□□□□ 0.59
NEDD4P46934 RN7SL204P-201ENST00000582831 262 ntBASIC18.73■□□□□ 0.59
NEDD4P46934 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.73■□□□□ 0.59
NEDD4P46934 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.73■□□□□ 0.59
NEDD4P46934 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.73■□□□□ 0.59
NEDD4P46934 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.73■□□□□ 0.59
NEDD4P46934 AF228730.6-201ENST00000641497 218 ntBASIC18.73■□□□□ 0.59
NEDD4P46934 AC084121.3-201ENST00000641716 218 ntBASIC18.73■□□□□ 0.59
NEDD4P46934 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.73■□□□□ 0.59
NEDD4P46934 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.72■□□□□ 0.59
NEDD4P46934 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.72■□□□□ 0.59
NEDD4P46934 CICP13-201ENST00000422015 2789 ntBASIC18.72■□□□□ 0.59
NEDD4P46934 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.72■□□□□ 0.59
NEDD4P46934 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.72■□□□□ 0.59
NEDD4P46934 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NEDD4P46934 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
NEDD4P46934 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.72■□□□□ 0.59
NEDD4P46934 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
NEDD4P46934 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.72■□□□□ 0.59
NEDD4P46934 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.72■□□□□ 0.59
NEDD4P46934 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.72■□□□□ 0.59
NEDD4P46934 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.72■□□□□ 0.59
NEDD4P46934 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.72■□□□□ 0.59
NEDD4P46934 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.72■□□□□ 0.59
NEDD4P46934 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.72■□□□□ 0.59
NEDD4P46934 MIR4745-201ENST00000577608 62 ntBASIC18.72■□□□□ 0.59
NEDD4P46934 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NEDD4P46934 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.72■□□□□ 0.59
NEDD4P46934 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4P46934 BTBD7P1-201ENST00000447253 1453 ntBASIC18.72■□□□□ 0.59
NEDD4P46934 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
NEDD4P46934 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4P46934 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.71■□□□□ 0.59
NEDD4P46934 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4P46934 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4P46934 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4P46934 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.71■□□□□ 0.59
NEDD4P46934 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.71■□□□□ 0.59
NEDD4P46934 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.71■□□□□ 0.59
NEDD4P46934 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.71■□□□□ 0.59
NEDD4P46934 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4P46934 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4P46934 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
NEDD4P46934 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NEDD4P46934 AC002472.2-201ENST00000442739 958 ntBASIC18.71■□□□□ 0.59
NEDD4P46934 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.71■□□□□ 0.59
NEDD4P46934 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4P46934 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.71■□□□□ 0.59
NEDD4P46934 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.71■□□□□ 0.59
NEDD4P46934 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.71■□□□□ 0.59
NEDD4P46934 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.71■□□□□ 0.59
NEDD4P46934 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.71■□□□□ 0.59
NEDD4P46934 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms