Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.28□□□□□ -0.12
CDKN2AP42771 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.27□□□□□ -0.12
CDKN2AP42771 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CDKN2AP42771 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.27□□□□□ -0.12
CDKN2AP42771 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CDKN2AP42771 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CDKN2AP42771 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CDKN2AP42771 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 AC006058.4-201ENST00000624016 1670 ntBASIC14.27□□□□□ -0.12
CDKN2AP42771 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
CDKN2AP42771 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CDKN2AP42771 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.27□□□□□ -0.12
CDKN2AP42771 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.27□□□□□ -0.12
CDKN2AP42771 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 TNRC18P2-201ENST00000417666 2714 ntBASIC14.27□□□□□ -0.12
CDKN2AP42771 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDKN2AP42771 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.27□□□□□ -0.13
CDKN2AP42771 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 MCCD1P2-201ENST00000423228 335 ntBASIC14.27□□□□□ -0.13
CDKN2AP42771 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKN2AP42771 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDKN2AP42771 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKN2AP42771 AC079140.1-201ENST00000508039 487 ntBASIC14.27□□□□□ -0.13
CDKN2AP42771 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKN2AP42771 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.27□□□□□ -0.13
CDKN2AP42771 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKN2AP42771 AC040169.1-201ENST00000565382 521 ntBASIC14.27□□□□□ -0.13
CDKN2AP42771 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.27□□□□□ -0.13
CDKN2AP42771 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.27□□□□□ -0.13
CDKN2AP42771 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.27□□□□□ -0.13
CDKN2AP42771 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.27□□□□□ -0.13
CDKN2AP42771 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.27□□□□□ -0.13
CDKN2AP42771 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CDKN2AP42771 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.27□□□□□ -0.13
CDKN2AP42771 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDKN2AP42771 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.27□□□□□ -0.13
CDKN2AP42771 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDKN2AP42771 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDKN2AP42771 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDKN2AP42771 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CDKN2AP42771 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.26□□□□□ -0.13
CDKN2AP42771 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CDKN2AP42771 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
CDKN2AP42771 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDKN2AP42771 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDKN2AP42771 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.26□□□□□ -0.13
CDKN2AP42771 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDKN2AP42771 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.26□□□□□ -0.13
CDKN2AP42771 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.26□□□□□ -0.13
CDKN2AP42771 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDKN2AP42771 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms