Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC015910.1-201ENST00000579400 975 ntBASIC19.85■□□□□ 0.77
RFC4P35249 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RFC4P35249 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RFC4P35249 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC4P35249 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RFC4P35249 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.85■□□□□ 0.77
RFC4P35249 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RFC4P35249 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFC4P35249 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.84■□□□□ 0.77
RFC4P35249 AL138709.1-201ENST00000614840 1693 ntBASIC19.84■□□□□ 0.77
RFC4P35249 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.84■□□□□ 0.77
RFC4P35249 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.84■□□□□ 0.77
RFC4P35249 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.84■□□□□ 0.77
RFC4P35249 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
RFC4P35249 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RFC4P35249 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.84■□□□□ 0.77
RFC4P35249 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.84■□□□□ 0.77
RFC4P35249 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RFC4P35249 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.84■□□□□ 0.77
RFC4P35249 AC005077.2-201ENST00000449786 690 ntBASIC19.84■□□□□ 0.77
RFC4P35249 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 AC079328.1-201ENST00000560358 952 ntBASIC19.84■□□□□ 0.77
RFC4P35249 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.84■□□□□ 0.77
RFC4P35249 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.84■□□□□ 0.77
RFC4P35249 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.84■□□□□ 0.77
RFC4P35249 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.84■□□□□ 0.77
RFC4P35249 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RFC4P35249 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.84■□□□□ 0.77
RFC4P35249 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RFC4P35249 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.84■□□□□ 0.77
RFC4P35249 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.84■□□□□ 0.77
RFC4P35249 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFC4P35249 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.83■□□□□ 0.77
RFC4P35249 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.83■□□□□ 0.77
RFC4P35249 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RFC4P35249 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC4P35249 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RFC4P35249 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RFC4P35249 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC4P35249 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC4P35249 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC4P35249 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFC4P35249 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.83■□□□□ 0.77
RFC4P35249 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.83■□□□□ 0.77
RFC4P35249 AC091804.1-201ENST00000486888 567 ntBASIC19.83■□□□□ 0.77
RFC4P35249 RPSAP36-202ENST00000494591 1261 ntBASIC19.83■□□□□ 0.77
RFC4P35249 RNA5SP486-201ENST00000515961 83 ntBASIC19.83■□□□□ 0.77
RFC4P35249 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.83■□□□□ 0.77
RFC4P35249 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.83■□□□□ 0.77
RFC4P35249 AC020914.3-201ENST00000594712 304 ntBASIC19.83■□□□□ 0.77
RFC4P35249 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RFC4P35249 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.83■□□□□ 0.77
RFC4P35249 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
RFC4P35249 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFC4P35249 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
RFC4P35249 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.83■□□□□ 0.76
RFC4P35249 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFC4P35249 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
RFC4P35249 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFC4P35249 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFC4P35249 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RFC4P35249 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFC4P35249 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFC4P35249 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms