Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 INTS4P1-201ENST00000438455 1935 ntBASIC11.82□□□□□ -0.52
CKS2P33552 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 AC090616.6-203ENST00000579186 1945 ntBASIC11.82□□□□□ -0.52
CKS2P33552 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CKS2P33552 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CKS2P33552 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.81□□□□□ -0.52
CKS2P33552 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.81□□□□□ -0.52
CKS2P33552 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.81□□□□□ -0.52
CKS2P33552 TSPY5P-201ENST00000426936 936 ntBASIC11.81□□□□□ -0.52
CKS2P33552 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
CKS2P33552 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.81□□□□□ -0.52
CKS2P33552 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.81□□□□□ -0.52
CKS2P33552 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.81□□□□□ -0.52
CKS2P33552 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.81□□□□□ -0.52
CKS2P33552 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.81□□□□□ -0.52
CKS2P33552 MIR4497-201ENST00000583208 89 ntBASIC11.81□□□□□ -0.52
CKS2P33552 AC010331.1-201ENST00000611423 582 ntBASIC11.81□□□□□ -0.52
CKS2P33552 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 HYMAI.1-201ENST00000620949 238 ntBASIC11.81□□□□□ -0.52
CKS2P33552 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.81□□□□□ -0.52
CKS2P33552 AP000867.4-201ENST00000641616 219 ntBASIC11.81□□□□□ -0.52
CKS2P33552 AP006294.2-201ENST00000641667 209 ntBASIC11.81□□□□□ -0.52
CKS2P33552 AC105250.1-201ENST00000509378 2057 ntBASIC11.81□□□□□ -0.52
CKS2P33552 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 LINC00552-201ENST00000625151 2579 ntBASIC11.81□□□□□ -0.52
CKS2P33552 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CKS2P33552 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CKS2P33552 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.81□□□□□ -0.52
CKS2P33552 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CKS2P33552 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.81□□□□□ -0.52
CKS2P33552 AL390755.1-201ENST00000623716 2027 ntBASIC11.81□□□□□ -0.52
CKS2P33552 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CKS2P33552 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
CKS2P33552 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CKS2P33552 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 HAUS4P1-201ENST00000406739 1145 ntBASIC11.8□□□□□ -0.52
CKS2P33552 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.8□□□□□ -0.52
CKS2P33552 MINOS1P3-201ENST00000457048 203 ntBASIC11.8□□□□□ -0.52
CKS2P33552 AC092647.4-201ENST00000457211 535 ntBASIC11.8□□□□□ -0.52
CKS2P33552 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CKS2P33552 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms