Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHMP24386 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
CHMP24386 KRT8P23-201ENST00000560090 1207 ntBASIC15□□□□□ -0.01
CHMP24386 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHMP24386 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15□□□□□ -0.01
CHMP24386 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15□□□□□ -0.01
CHMP24386 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 AL592424.1-201ENST00000563624 1536 ntBASIC15□□□□□ -0.01
CHMP24386 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15□□□□□ -0.01
CHMP24386 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15□□□□□ -0.01
CHMP24386 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHMP24386 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHMP24386 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHMP24386 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP24386 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 KRT18P28-201ENST00000453838 1332 ntBASIC14.99□□□□□ -0.01
CHMP24386 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CHMP24386 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.99□□□□□ -0.01
CHMP24386 AL592309.1-201ENST00000443127 649 ntBASIC14.99□□□□□ -0.01
CHMP24386 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.99□□□□□ -0.01
CHMP24386 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP24386 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CHMP24386 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CHMP24386 FLJ16779-201ENST00000612722 7638 ntBASIC14.99□□□□□ -0.01
CHMP24386 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CHMP24386 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CHMP24386 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.99□□□□□ -0.01
CHMP24386 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHMP24386 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.99□□□□□ -0.01
CHMP24386 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP24386 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CHMP24386 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHMP24386 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP24386 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP24386 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP24386 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHMP24386 SSR4P1-203ENST00000599569 2260 ntBASIC14.98□□□□□ -0.01
CHMP24386 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP24386 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.98□□□□□ -0.01
CHMP24386 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.98□□□□□ -0.01
CHMP24386 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHMP24386 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP24386 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.98□□□□□ -0.01
CHMP24386 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP24386 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
CHMP24386 AP003680.1-201ENST00000598970 3660 ntBASIC14.98□□□□□ -0.01
CHMP24386 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP24386 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CHMP24386 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP24386 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms