Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
MMP8P22894 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 AL080243.2-201ENST00000418783 582 ntBASIC16.75■□□□□ 0.27
MMP8P22894 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.75■□□□□ 0.27
MMP8P22894 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.75■□□□□ 0.27
MMP8P22894 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.75■□□□□ 0.27
MMP8P22894 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MMP8P22894 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.75■□□□□ 0.27
MMP8P22894 AC127383.1-201ENST00000444697 1800 ntBASIC16.75■□□□□ 0.27
MMP8P22894 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
MMP8P22894 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MMP8P22894 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MMP8P22894 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP8P22894 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
MMP8P22894 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 AC087481.3-201ENST00000602886 1894 ntBASIC16.74■□□□□ 0.27
MMP8P22894 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.74■□□□□ 0.27
MMP8P22894 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
MMP8P22894 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.74■□□□□ 0.27
MMP8P22894 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP8P22894 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MMP8P22894 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.74■□□□□ 0.27
MMP8P22894 AC015911.4-201ENST00000588022 1070 ntBASIC16.74■□□□□ 0.27
MMP8P22894 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP8P22894 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.74■□□□□ 0.27
MMP8P22894 AL589739.1-201ENST00000607720 493 ntBASIC16.74■□□□□ 0.27
MMP8P22894 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP8P22894 Z92544.3-201ENST00000624747 417 ntBASIC16.74■□□□□ 0.27
MMP8P22894 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP8P22894 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP8P22894 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.74■□□□□ 0.27
MMP8P22894 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
MMP8P22894 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MMP8P22894 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 CETN4P-206ENST00000642099 2168 ntBASIC16.74■□□□□ 0.27
MMP8P22894 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MMP8P22894 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
MMP8P22894 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MMP8P22894 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MMP8P22894 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.73■□□□□ 0.27
MMP8P22894 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.73■□□□□ 0.27
MMP8P22894 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.73■□□□□ 0.27
MMP8P22894 CNN2P2-201ENST00000443536 909 ntBASIC16.73■□□□□ 0.27
MMP8P22894 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
MMP8P22894 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 CNN2P3-201ENST00000450201 906 ntBASIC16.73■□□□□ 0.27
MMP8P22894 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.73■□□□□ 0.27
MMP8P22894 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MMP8P22894 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms