Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
NR4A1P22736 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
NR4A1P22736 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NR4A1P22736 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NR4A1P22736 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
NR4A1P22736 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NR4A1P22736 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NR4A1P22736 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.95□□□□□ -0.02
NR4A1P22736 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 PCDHA3-202ENST00000532566 4594 ntBASIC14.95□□□□□ -0.02
NR4A1P22736 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NR4A1P22736 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NR4A1P22736 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NR4A1P22736 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
NR4A1P22736 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.95□□□□□ -0.02
NR4A1P22736 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.95□□□□□ -0.02
NR4A1P22736 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 AL590627.1-203ENST00000421194 1026 ntBASIC14.95□□□□□ -0.02
NR4A1P22736 ACTG1P4-201ENST00000425123 1122 ntBASIC14.95□□□□□ -0.02
NR4A1P22736 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.95□□□□□ -0.02
NR4A1P22736 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.95□□□□□ -0.02
NR4A1P22736 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
NR4A1P22736 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 AC243591.1-201ENST00000452967 1364 ntBASIC14.95□□□□□ -0.02
NR4A1P22736 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NR4A1P22736 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 AL137784.3-201ENST00000623858 2288 ntBASIC14.95□□□□□ -0.02
NR4A1P22736 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.95□□□□□ -0.02
NR4A1P22736 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NR4A1P22736 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NR4A1P22736 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.95□□□□□ -0.02
NR4A1P22736 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NR4A1P22736 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 IL9RP2-201ENST00000423948 1312 ntBASIC14.94□□□□□ -0.02
NR4A1P22736 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A1P22736 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A1P22736 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A1P22736 AC107918.4-201ENST00000641966 3141 ntBASIC14.94□□□□□ -0.02
NR4A1P22736 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NR4A1P22736 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A1P22736 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.94□□□□□ -0.02
NR4A1P22736 LINC00982-205ENST00000420957 435 ntBASIC14.94□□□□□ -0.02
NR4A1P22736 KRT18P27-201ENST00000427733 1299 ntBASIC14.94□□□□□ -0.02
NR4A1P22736 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.94□□□□□ -0.02
NR4A1P22736 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.94□□□□□ -0.02
NR4A1P22736 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.94□□□□□ -0.02
NR4A1P22736 AL139424.1-201ENST00000607572 797 ntBASIC14.94□□□□□ -0.02
NR4A1P22736 MIR1199-201ENST00000621445 119 ntBASIC14.94□□□□□ -0.02
NR4A1P22736 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.94□□□□□ -0.02
NR4A1P22736 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
NR4A1P22736 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.94□□□□□ -0.02
NR4A1P22736 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NR4A1P22736 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
NR4A1P22736 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NR4A1P22736 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A1P22736 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A1P22736 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.94□□□□□ -0.02
NR4A1P22736 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.94□□□□□ -0.02
NR4A1P22736 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
NR4A1P22736 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR4A1P22736 CICP23-201ENST00000605013 2741 ntBASIC14.94□□□□□ -0.02
NR4A1P22736 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.93□□□□□ -0.02
NR4A1P22736 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR4A1P22736 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms