Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 CICP13-201ENST00000422015 2789 ntBASIC16.43■□□□□ 0.22
ERCC2P18074 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ERCC2P18074 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ERCC2P18074 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ERCC2P18074 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ERCC2P18074 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.42■□□□□ 0.22
ERCC2P18074 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
ERCC2P18074 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ERCC2P18074 RPL37AP1-201ENST00000412502 279 ntBASIC16.42■□□□□ 0.22
ERCC2P18074 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.42■□□□□ 0.22
ERCC2P18074 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ERCC2P18074 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC2P18074 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC2P18074 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC2P18074 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC2P18074 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.42■□□□□ 0.22
ERCC2P18074 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
ERCC2P18074 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ERCC2P18074 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC2P18074 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.42■□□□□ 0.22
ERCC2P18074 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC2P18074 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.42■□□□□ 0.22
ERCC2P18074 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ERCC2P18074 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC2P18074 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC2P18074 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC2P18074 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC2P18074 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC2P18074 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC2P18074 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ERCC2P18074 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.41■□□□□ 0.22
ERCC2P18074 FO393414.2-201ENST00000405153 598 ntBASIC16.41■□□□□ 0.22
ERCC2P18074 AL080243.2-201ENST00000418783 582 ntBASIC16.41■□□□□ 0.22
ERCC2P18074 AC107890.1-201ENST00000422478 521 ntBASIC16.41■□□□□ 0.22
ERCC2P18074 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC2P18074 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC2P18074 FAM86GP-201ENST00000448322 971 ntBASIC16.41■□□□□ 0.22
ERCC2P18074 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC2P18074 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC2P18074 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC2P18074 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC2P18074 AC067863.1-201ENST00000494933 530 ntBASIC16.41■□□□□ 0.22
ERCC2P18074 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.41■□□□□ 0.22
ERCC2P18074 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.41■□□□□ 0.22
ERCC2P18074 AC140878.1-201ENST00000565277 250 ntBASIC16.41■□□□□ 0.22
ERCC2P18074 SPDYE12P-201ENST00000618416 771 ntBASIC16.41■□□□□ 0.22
ERCC2P18074 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ERCC2P18074 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC2P18074 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC2P18074 NFIC-211ENST00000641145 8399 ntBASIC16.4■□□□□ 0.22
ERCC2P18074 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.4■□□□□ 0.22
ERCC2P18074 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ERCC2P18074 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC2P18074 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ERCC2P18074 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ERCC2P18074 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms