Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CTLA4P16410 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.19□□□□□ -0.14
CTLA4P16410 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.19□□□□□ -0.14
CTLA4P16410 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.19□□□□□ -0.14
CTLA4P16410 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.19□□□□□ -0.14
CTLA4P16410 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.19□□□□□ -0.14
CTLA4P16410 AC022145.2-201ENST00000598203 171 ntBASIC14.19□□□□□ -0.14
CTLA4P16410 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.19□□□□□ -0.14
CTLA4P16410 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CTLA4P16410 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CTLA4P16410 AC105339.1-204ENST00000636249 355 ntBASIC14.19□□□□□ -0.14
CTLA4P16410 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.19□□□□□ -0.14
CTLA4P16410 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CTLA4P16410 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.19□□□□□ -0.14
CTLA4P16410 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.19□□□□□ -0.14
CTLA4P16410 AC105250.1-201ENST00000509378 2057 ntBASIC14.19□□□□□ -0.14
CTLA4P16410 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CTLA4P16410 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CTLA4P16410 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.19□□□□□ -0.14
CTLA4P16410 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.19□□□□□ -0.14
CTLA4P16410 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 TMBIM7P-203ENST00000641617 1718 ntBASIC14.18□□□□□ -0.14
CTLA4P16410 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CTLA4P16410 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CTLA4P16410 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.18□□□□□ -0.14
CTLA4P16410 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CTLA4P16410 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 AC090616.6-203ENST00000579186 1945 ntBASIC14.18□□□□□ -0.14
CTLA4P16410 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CTLA4P16410 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.18□□□□□ -0.14
CTLA4P16410 AL139010.1-201ENST00000454878 894 ntBASIC14.18□□□□□ -0.14
CTLA4P16410 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CTLA4P16410 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CTLA4P16410 RARRES2P9-201ENST00000565168 469 ntBASIC14.18□□□□□ -0.14
CTLA4P16410 AC005829.1-201ENST00000570002 483 ntBASIC14.18□□□□□ -0.14
CTLA4P16410 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.18□□□□□ -0.14
CTLA4P16410 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.18□□□□□ -0.14
CTLA4P16410 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.18□□□□□ -0.14
CTLA4P16410 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CTLA4P16410 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CTLA4P16410 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 AP002414.2-201ENST00000591780 3365 ntBASIC14.18□□□□□ -0.14
CTLA4P16410 AC087481.3-201ENST00000602886 1894 ntBASIC14.18□□□□□ -0.14
CTLA4P16410 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CTLA4P16410 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.18□□□□□ -0.14
CTLA4P16410 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CTLA4P16410 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 AC009090.5-201ENST00000624886 2285 ntBASIC14.17□□□□□ -0.14
CTLA4P16410 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 AC103702.1-201ENST00000548801 2630 ntBASIC14.17□□□□□ -0.14
CTLA4P16410 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms