Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 BASP1P1-201ENST00000430708 665 ntBASIC18.33■□□□□ 0.52
SCG2P13521 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.33■□□□□ 0.52
SCG2P13521 AC009477.1-201ENST00000452936 217 ntBASIC18.33■□□□□ 0.52
SCG2P13521 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SCG2P13521 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCG2P13521 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.33■□□□□ 0.52
SCG2P13521 ZNF890P-202ENST00000530367 1156 ntBASIC18.33■□□□□ 0.52
SCG2P13521 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG2P13521 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.33■□□□□ 0.52
SCG2P13521 PAUPAR-201ENST00000630360 2965 ntBASIC18.33■□□□□ 0.52
SCG2P13521 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.33■□□□□ 0.52
SCG2P13521 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCG2P13521 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG2P13521 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
SCG2P13521 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG2P13521 AL607033.1-201ENST00000623900 1599 ntBASIC18.33■□□□□ 0.52
SCG2P13521 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG2P13521 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG2P13521 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCG2P13521 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.33■□□□□ 0.52
SCG2P13521 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.33■□□□□ 0.52
SCG2P13521 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SCG2P13521 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCG2P13521 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG2P13521 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG2P13521 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.32■□□□□ 0.52
SCG2P13521 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCG2P13521 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.32■□□□□ 0.52
SCG2P13521 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 TARDBPP1-201ENST00000442013 1203 ntBASIC18.32■□□□□ 0.52
SCG2P13521 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.32■□□□□ 0.52
SCG2P13521 INGX-202ENST00000489074 768 ntBASIC18.32■□□□□ 0.52
SCG2P13521 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.32■□□□□ 0.52
SCG2P13521 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.32■□□□□ 0.52
SCG2P13521 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.32■□□□□ 0.52
SCG2P13521 AC138761.1-201ENST00000584393 385 ntBASIC18.32■□□□□ 0.52
SCG2P13521 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG2P13521 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SCG2P13521 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.32■□□□□ 0.52
SCG2P13521 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG2P13521 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG2P13521 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCG2P13521 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCG2P13521 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.32■□□□□ 0.52
SCG2P13521 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.32■□□□□ 0.52
SCG2P13521 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SCG2P13521 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
SCG2P13521 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.31■□□□□ 0.52
SCG2P13521 Z97205.2-201ENST00000564697 1639 ntBASIC18.31■□□□□ 0.52
SCG2P13521 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SCG2P13521 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.31■□□□□ 0.52
SCG2P13521 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.31■□□□□ 0.52
SCG2P13521 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.31■□□□□ 0.52
SCG2P13521 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.31■□□□□ 0.52
SCG2P13521 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.31■□□□□ 0.52
SCG2P13521 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.31■□□□□ 0.52
SCG2P13521 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.31■□□□□ 0.52
SCG2P13521 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.31■□□□□ 0.52
SCG2P13521 AC044860.1-202ENST00000559481 777 ntBASIC18.31■□□□□ 0.52
SCG2P13521 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.31■□□□□ 0.52
SCG2P13521 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.31■□□□□ 0.52
SCG2P13521 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.31■□□□□ 0.52
SCG2P13521 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCG2P13521 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCG2P13521 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.31■□□□□ 0.52
SCG2P13521 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.31■□□□□ 0.52
SCG2P13521 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.3■□□□□ 0.52
SCG2P13521 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.3■□□□□ 0.52
SCG2P13521 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms