Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MS4A1P11836 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MS4A1P11836 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MS4A1P11836 AC004987.2-201ENST00000395959 1148 ntBASIC20.54■□□□□ 0.88
MS4A1P11836 TIMM8BP1-201ENST00000452384 211 ntBASIC20.54■□□□□ 0.88
MS4A1P11836 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.54■□□□□ 0.88
MS4A1P11836 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.54■□□□□ 0.88
MS4A1P11836 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A1P11836 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.54■□□□□ 0.88
MS4A1P11836 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.54■□□□□ 0.88
MS4A1P11836 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
MS4A1P11836 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MS4A1P11836 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
MS4A1P11836 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.53■□□□□ 0.88
MS4A1P11836 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.53■□□□□ 0.88
MS4A1P11836 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.53■□□□□ 0.88
MS4A1P11836 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.53■□□□□ 0.88
MS4A1P11836 AC005829.1-201ENST00000570002 483 ntBASIC20.53■□□□□ 0.88
MS4A1P11836 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.53■□□□□ 0.88
MS4A1P11836 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.53■□□□□ 0.88
MS4A1P11836 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.53■□□□□ 0.88
MS4A1P11836 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC20.53■□□□□ 0.88
MS4A1P11836 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MS4A1P11836 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
MS4A1P11836 ELL2P1-201ENST00000413990 1906 ntBASIC20.53■□□□□ 0.88
MS4A1P11836 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MS4A1P11836 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.53■□□□□ 0.88
MS4A1P11836 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MS4A1P11836 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MS4A1P11836 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MS4A1P11836 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.52■□□□□ 0.88
MS4A1P11836 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
MS4A1P11836 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.52■□□□□ 0.88
MS4A1P11836 AL592309.1-201ENST00000443127 649 ntBASIC20.52■□□□□ 0.88
MS4A1P11836 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.52■□□□□ 0.88
MS4A1P11836 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.52■□□□□ 0.88
MS4A1P11836 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.52■□□□□ 0.88
MS4A1P11836 AC055717.3-201ENST00000622967 595 ntBASIC20.52■□□□□ 0.88
MS4A1P11836 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MS4A1P11836 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MS4A1P11836 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.52■□□□□ 0.88
MS4A1P11836 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.52■□□□□ 0.88
MS4A1P11836 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MS4A1P11836 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
MS4A1P11836 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MS4A1P11836 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms