Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RAB40ALP0C0E4 RNF216P1-203ENST00000404404 2427 ntBASIC15.05■□□□□ 0
RAB40ALP0C0E4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB40ALP0C0E4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RAB40ALP0C0E4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RAB40ALP0C0E4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB40ALP0C0E4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
RAB40ALP0C0E4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
RAB40ALP0C0E4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 AL512384.1-201ENST00000406683 331 ntBASIC15.05■□□□□ -0
RAB40ALP0C0E4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 MYCLP2-201ENST00000449268 967 ntBASIC15.05■□□□□ -0
RAB40ALP0C0E4 INE1-201ENST00000456273 945 ntBASIC15.05■□□□□ -0
RAB40ALP0C0E4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 Z97205.2-201ENST00000564697 1639 ntBASIC15.05■□□□□ -0
RAB40ALP0C0E4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.05■□□□□ -0
RAB40ALP0C0E4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB40ALP0C0E4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 AC008741.2-201ENST00000612792 3115 ntBASIC15.04■□□□□ -0
RAB40ALP0C0E4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 AL589987.1-201ENST00000453380 819 ntBASIC15.04■□□□□ -0
RAB40ALP0C0E4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 GPR53P-205ENST00000457298 1084 ntBASIC15.04■□□□□ -0
RAB40ALP0C0E4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 AC123567.1-201ENST00000548294 1261 ntBASIC15.04■□□□□ -0
RAB40ALP0C0E4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 WASH4P-201ENST00000564273 1246 ntBASIC15.04■□□□□ -0
RAB40ALP0C0E4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB40ALP0C0E4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
RAB40ALP0C0E4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms