Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 AC087499.6-201ENST00000411576 835 ntBASIC14.57□□□□□ -0.08
P04436 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.57□□□□□ -0.08
P04436 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.57□□□□□ -0.08
P04436 AC015922.1-201ENST00000421102 1152 ntBASIC14.57□□□□□ -0.08
P04436 MEP1AP4-201ENST00000423244 1087 ntBASIC14.57□□□□□ -0.08
P04436 AL353779.1-201ENST00000434793 351 ntBASIC14.57□□□□□ -0.08
P04436 GNAQP1-201ENST00000444815 1067 ntBASIC14.57□□□□□ -0.08
P04436 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.57□□□□□ -0.08
P04436 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.57□□□□□ -0.08
P04436 PHKG1P2-201ENST00000457537 863 ntBASIC14.57□□□□□ -0.08
P04436 AC093004.1-201ENST00000508850 424 ntBASIC14.57□□□□□ -0.08
P04436 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
P04436 TPRX2P-201ENST00000535362 881 ntBASIC14.57□□□□□ -0.08
P04436 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
P04436 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
P04436 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.57□□□□□ -0.08
P04436 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.57□□□□□ -0.08
P04436 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.57□□□□□ -0.08
P04436 AL450472.2-201ENST00000603663 1156 ntBASIC14.57□□□□□ -0.08
P04436 AL358472.5-202ENST00000641448 1267 ntBASIC14.57□□□□□ -0.08
P04436 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
P04436 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.57□□□□□ -0.08
P04436 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
P04436 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.57□□□□□ -0.08
P04436 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.57□□□□□ -0.08
P04436 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.57□□□□□ -0.08
P04436 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
P04436 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.56□□□□□ -0.08
P04436 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.56□□□□□ -0.08
P04436 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
P04436 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
P04436 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.56□□□□□ -0.08
P04436 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.56□□□□□ -0.08
P04436 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.56□□□□□ -0.08
P04436 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
P04436 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
P04436 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 DFFBP1-201ENST00000433250 979 ntBASIC14.56□□□□□ -0.08
P04436 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
P04436 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.56□□□□□ -0.08
P04436 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.56□□□□□ -0.08
P04436 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.56□□□□□ -0.08
P04436 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.56□□□□□ -0.08
P04436 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.56□□□□□ -0.08
P04436 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
P04436 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
P04436 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
P04436 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.56□□□□□ -0.08
P04436 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
P04436 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 AL391825.1-201ENST00000457671 1364 ntBASIC14.56□□□□□ -0.08
P04436 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
P04436 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
P04436 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.56□□□□□ -0.08
P04436 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.56□□□□□ -0.08
P04436 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.56□□□□□ -0.08
P04436 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
P04436 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
P04436 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
P04436 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.55□□□□□ -0.08
P04436 Z97205.2-201ENST00000564697 1639 ntBASIC14.55□□□□□ -0.08
P04436 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
P04436 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.55□□□□□ -0.08
P04436 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
P04436 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04436 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
P04436 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04436 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
P04436 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.55□□□□□ -0.08
P04436 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.55□□□□□ -0.08
P04436 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms