Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TRBV12-3P01733 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TRBV12-3P01733 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.35□□□□□ -0.43
TRBV12-3P01733 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 AL139384.1-201ENST00000612143 3047 ntBASIC12.35□□□□□ -0.43
TRBV12-3P01733 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 AZGP1P1-201ENST00000411909 902 ntBASIC12.35□□□□□ -0.43
TRBV12-3P01733 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 AC005498.2-205ENST00000593218 784 ntBASIC12.35□□□□□ -0.43
TRBV12-3P01733 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 TEX28P1-201ENST00000613479 1221 ntBASIC12.35□□□□□ -0.43
TRBV12-3P01733 TEX28P2-201ENST00000617764 1221 ntBASIC12.35□□□□□ -0.43
TRBV12-3P01733 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.35□□□□□ -0.43
TRBV12-3P01733 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRBV12-3P01733 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 HLA-V-204ENST00000476601 1289 ntBASIC12.34□□□□□ -0.43
TRBV12-3P01733 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 AL158211.3-201ENST00000607385 239 ntBASIC12.34□□□□□ -0.43
TRBV12-3P01733 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 AC011477.6-201ENST00000604980 1927 ntBASIC12.34□□□□□ -0.43
TRBV12-3P01733 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRBV12-3P01733 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.34□□□□□ -0.43
TRBV12-3P01733 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRBV12-3P01733 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms