Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC091544.8-201ENST00000619490 361 ntBASIC15.85■□□□□ 0.13
PDGFBP01127 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.85■□□□□ 0.13
PDGFBP01127 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.85■□□□□ 0.13
PDGFBP01127 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PDGFBP01127 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.85■□□□□ 0.13
PDGFBP01127 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.85■□□□□ 0.13
PDGFBP01127 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PDGFBP01127 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFBP01127 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.84■□□□□ 0.13
PDGFBP01127 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFBP01127 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.84■□□□□ 0.13
PDGFBP01127 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.84■□□□□ 0.13
PDGFBP01127 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.84■□□□□ 0.13
PDGFBP01127 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PDGFBP01127 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 ACTG1P2-201ENST00000415776 1125 ntBASIC15.84■□□□□ 0.13
PDGFBP01127 ACTG1P11-201ENST00000425411 1125 ntBASIC15.84■□□□□ 0.13
PDGFBP01127 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.84■□□□□ 0.13
PDGFBP01127 RPL13AP19-201ENST00000434320 584 ntBASIC15.84■□□□□ 0.13
PDGFBP01127 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.84■□□□□ 0.13
PDGFBP01127 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFBP01127 PHKG1P2-201ENST00000457537 863 ntBASIC15.84■□□□□ 0.13
PDGFBP01127 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFBP01127 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.84■□□□□ 0.13
PDGFBP01127 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFBP01127 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PDGFBP01127 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PDGFBP01127 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFBP01127 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PDGFBP01127 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
PDGFBP01127 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.84■□□□□ 0.13
PDGFBP01127 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFBP01127 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFBP01127 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
PDGFBP01127 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PDGFBP01127 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.83■□□□□ 0.13
PDGFBP01127 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFBP01127 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFBP01127 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.83■□□□□ 0.12
PDGFBP01127 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 AC136604.1-201ENST00000418535 575 ntBASIC15.83■□□□□ 0.12
PDGFBP01127 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.83■□□□□ 0.12
PDGFBP01127 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFBP01127 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.83■□□□□ 0.12
PDGFBP01127 AC005730.2-201ENST00000564549 1184 ntBASIC15.83■□□□□ 0.12
PDGFBP01127 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.83■□□□□ 0.12
PDGFBP01127 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.83■□□□□ 0.12
PDGFBP01127 AF254983.2-201ENST00000612331 135 ntBASIC15.83■□□□□ 0.12
PDGFBP01127 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.83■□□□□ 0.12
PDGFBP01127 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
PDGFBP01127 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.83■□□□□ 0.12
PDGFBP01127 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.83■□□□□ 0.12
PDGFBP01127 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PDGFBP01127 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms