Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KDM4BO94953 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
KDM4BO94953 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.14□□□□□ -0.15
KDM4BO94953 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.14□□□□□ -0.15
KDM4BO94953 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.14□□□□□ -0.15
KDM4BO94953 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 AC006058.4-201ENST00000624016 1670 ntBASIC14.14□□□□□ -0.15
KDM4BO94953 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KDM4BO94953 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KDM4BO94953 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KDM4BO94953 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.13□□□□□ -0.15
KDM4BO94953 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.13□□□□□ -0.15
KDM4BO94953 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
KDM4BO94953 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.13□□□□□ -0.15
KDM4BO94953 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.13□□□□□ -0.15
KDM4BO94953 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.13□□□□□ -0.15
KDM4BO94953 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.13□□□□□ -0.15
KDM4BO94953 AF186996.4-201ENST00000467186 377 ntBASIC14.13□□□□□ -0.15
KDM4BO94953 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KDM4BO94953 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.13□□□□□ -0.15
KDM4BO94953 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.13□□□□□ -0.15
KDM4BO94953 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.13□□□□□ -0.15
KDM4BO94953 AC005593.1-201ENST00000624894 515 ntBASIC14.13□□□□□ -0.15
KDM4BO94953 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.13□□□□□ -0.15
KDM4BO94953 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.13□□□□□ -0.15
KDM4BO94953 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 AC136621.1-201ENST00000624017 2304 ntBASIC14.13□□□□□ -0.15
KDM4BO94953 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.13□□□□□ -0.15
KDM4BO94953 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.13□□□□□ -0.15
KDM4BO94953 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.13□□□□□ -0.15
KDM4BO94953 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KDM4BO94953 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KDM4BO94953 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.12□□□□□ -0.15
KDM4BO94953 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 SSR4P1-203ENST00000599569 2260 ntBASIC14.12□□□□□ -0.15
KDM4BO94953 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.12□□□□□ -0.15
KDM4BO94953 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KDM4BO94953 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KDM4BO94953 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.12□□□□□ -0.15
KDM4BO94953 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.12□□□□□ -0.15
KDM4BO94953 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 RPS2P28-201ENST00000314255 741 ntBASIC14.12□□□□□ -0.15
KDM4BO94953 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.12□□□□□ -0.15
KDM4BO94953 MRPL20P1-201ENST00000400819 433 ntBASIC14.12□□□□□ -0.15
KDM4BO94953 KRT18P67-201ENST00000432816 1264 ntBASIC14.12□□□□□ -0.15
KDM4BO94953 HNRNPDP1-201ENST00000439535 754 ntBASIC14.12□□□□□ -0.15
KDM4BO94953 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.12□□□□□ -0.15
KDM4BO94953 EMBP1-201ENST00000458200 901 ntBASIC14.12□□□□□ -0.15
KDM4BO94953 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDM4BO94953 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.12□□□□□ -0.15
KDM4BO94953 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.12□□□□□ -0.15
KDM4BO94953 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.12□□□□□ -0.15
KDM4BO94953 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.12□□□□□ -0.15
KDM4BO94953 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.12□□□□□ -0.15
KDM4BO94953 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms