Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLDN11O75508 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN11O75508 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 PIN1P1-201ENST00000412108 996 ntBASIC16.26■□□□□ 0.19
CLDN11O75508 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN11O75508 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN11O75508 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN11O75508 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CLDN11O75508 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.26■□□□□ 0.19
CLDN11O75508 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 LINC01115-203ENST00000606068 577 ntBASIC16.26■□□□□ 0.19
CLDN11O75508 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN11O75508 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN11O75508 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN11O75508 AL607033.1-201ENST00000623900 1599 ntBASIC16.26■□□□□ 0.19
CLDN11O75508 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLDN11O75508 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
CLDN11O75508 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN11O75508 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN11O75508 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 AC010491.1-201ENST00000563101 2797 ntBASIC16.25■□□□□ 0.19
CLDN11O75508 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLDN11O75508 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 SPDYE19P-201ENST00000338590 713 ntBASIC16.25■□□□□ 0.19
CLDN11O75508 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN11O75508 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN11O75508 MEP1AP4-201ENST00000423244 1087 ntBASIC16.25■□□□□ 0.19
CLDN11O75508 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN11O75508 MEIS3P1-201ENST00000495167 958 ntBASIC16.25■□□□□ 0.19
CLDN11O75508 AC093004.1-201ENST00000508850 424 ntBASIC16.25■□□□□ 0.19
CLDN11O75508 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN11O75508 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN11O75508 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN11O75508 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN11O75508 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.25■□□□□ 0.19
CLDN11O75508 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN11O75508 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN11O75508 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
CLDN11O75508 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLDN11O75508 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLDN11O75508 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN11O75508 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN11O75508 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN11O75508 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN11O75508 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CLDN11O75508 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN11O75508 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN11O75508 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN11O75508 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN11O75508 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN11O75508 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN11O75508 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN11O75508 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN11O75508 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN11O75508 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN11O75508 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN11O75508 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms