Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 MIR1199-201ENST00000621445 119 ntBASIC16.2■□□□□ 0.18
CDH16O75309 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH16O75309 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH16O75309 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH16O75309 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH16O75309 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH16O75309 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH16O75309 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH16O75309 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH16O75309 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH16O75309 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CDH16O75309 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH16O75309 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CDH16O75309 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH16O75309 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDH16O75309 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH16O75309 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 AL390755.1-201ENST00000623716 2027 ntBASIC16.19■□□□□ 0.18
CDH16O75309 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH16O75309 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH16O75309 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH16O75309 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH16O75309 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CDH16O75309 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.19■□□□□ 0.18
CDH16O75309 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH16O75309 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH16O75309 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH16O75309 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH16O75309 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.19■□□□□ 0.18
CDH16O75309 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH16O75309 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.19■□□□□ 0.18
CDH16O75309 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH16O75309 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH16O75309 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.19■□□□□ 0.18
CDH16O75309 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDH16O75309 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH16O75309 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDH16O75309 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH16O75309 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH16O75309 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDH16O75309 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH16O75309 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH16O75309 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH16O75309 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CDH16O75309 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH16O75309 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDH16O75309 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH16O75309 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDH16O75309 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH16O75309 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH16O75309 KRT18P34-201ENST00000488218 1270 ntBASIC16.18■□□□□ 0.18
CDH16O75309 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH16O75309 OR7E14P-202ENST00000530490 1290 ntBASIC16.18■□□□□ 0.18
CDH16O75309 RN7SL510P-201ENST00000581311 263 ntBASIC16.18■□□□□ 0.18
CDH16O75309 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH16O75309 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH16O75309 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH16O75309 AL161772.1-201ENST00000610494 4412 ntBASIC16.18■□□□□ 0.18
CDH16O75309 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH16O75309 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 AL589702.1-201ENST00000641229 1509 ntBASIC16.18■□□□□ 0.18
CDH16O75309 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CDH16O75309 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH16O75309 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH16O75309 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CDH16O75309 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH16O75309 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms