Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GADD45BO75293 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GADD45BO75293 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.29■□□□□ 0.52
GADD45BO75293 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.29■□□□□ 0.52
GADD45BO75293 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GADD45BO75293 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.29■□□□□ 0.52
GADD45BO75293 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.29■□□□□ 0.52
GADD45BO75293 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
GADD45BO75293 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.29■□□□□ 0.52
GADD45BO75293 AC139749.1-202ENST00000617529 3139 ntBASIC18.29■□□□□ 0.52
GADD45BO75293 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GADD45BO75293 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GADD45BO75293 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.29■□□□□ 0.52
GADD45BO75293 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.29■□□□□ 0.52
GADD45BO75293 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.29■□□□□ 0.52
GADD45BO75293 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GADD45BO75293 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
GADD45BO75293 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GADD45BO75293 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GADD45BO75293 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.28■□□□□ 0.52
GADD45BO75293 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GADD45BO75293 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.28■□□□□ 0.52
GADD45BO75293 AC023024.2-201ENST00000623561 1993 ntBASIC18.28■□□□□ 0.52
GADD45BO75293 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.28■□□□□ 0.52
GADD45BO75293 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.28■□□□□ 0.52
GADD45BO75293 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.28■□□□□ 0.52
GADD45BO75293 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GADD45BO75293 AC079781.3-201ENST00000449110 356 ntBASIC18.28■□□□□ 0.52
GADD45BO75293 PRYP6-201ENST00000514804 343 ntBASIC18.28■□□□□ 0.52
GADD45BO75293 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.28■□□□□ 0.52
GADD45BO75293 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.28■□□□□ 0.52
GADD45BO75293 AC096734.2-201ENST00000562054 433 ntBASIC18.28■□□□□ 0.52
GADD45BO75293 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.28■□□□□ 0.52
GADD45BO75293 AL138918.1-201ENST00000568306 659 ntBASIC18.28■□□□□ 0.52
GADD45BO75293 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 AC005089.1-201ENST00000619486 2241 ntBASIC18.28■□□□□ 0.52
GADD45BO75293 AL691432.1-201ENST00000596308 1422 ntBASIC18.28■□□□□ 0.52
GADD45BO75293 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 AC126365.1-201ENST00000578585 1514 ntBASIC18.28■□□□□ 0.52
GADD45BO75293 REXO1L1P-202ENST00000608646 1974 ntBASIC18.28■□□□□ 0.52
GADD45BO75293 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GADD45BO75293 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GADD45BO75293 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
GADD45BO75293 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.27■□□□□ 0.52
GADD45BO75293 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 AL390755.1-201ENST00000623716 2027 ntBASIC18.27■□□□□ 0.52
GADD45BO75293 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.27■□□□□ 0.52
GADD45BO75293 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GADD45BO75293 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 CRYGEP-201ENST00000412192 528 ntBASIC18.27■□□□□ 0.52
GADD45BO75293 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.27■□□□□ 0.52
GADD45BO75293 AC140658.5-201ENST00000438532 169 ntBASIC18.27■□□□□ 0.52
GADD45BO75293 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.27■□□□□ 0.52
GADD45BO75293 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
GADD45BO75293 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.27■□□□□ 0.52
GADD45BO75293 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
GADD45BO75293 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.27■□□□□ 0.52
GADD45BO75293 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.27■□□□□ 0.52
GADD45BO75293 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.27■□□□□ 0.52
GADD45BO75293 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GADD45BO75293 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GADD45BO75293 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GADD45BO75293 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms