Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.77■□□□□ 0.28
OPHN1O60890 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.77■□□□□ 0.28
OPHN1O60890 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.77■□□□□ 0.28
OPHN1O60890 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.77■□□□□ 0.28
OPHN1O60890 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.77■□□□□ 0.28
OPHN1O60890 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.77■□□□□ 0.28
OPHN1O60890 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
OPHN1O60890 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
OPHN1O60890 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
OPHN1O60890 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
OPHN1O60890 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
OPHN1O60890 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
OPHN1O60890 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
OPHN1O60890 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
OPHN1O60890 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.77■□□□□ 0.27
OPHN1O60890 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
OPHN1O60890 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
OPHN1O60890 PAUPAR-201ENST00000630360 2965 ntBASIC16.77■□□□□ 0.27
OPHN1O60890 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.77■□□□□ 0.27
OPHN1O60890 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
OPHN1O60890 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
OPHN1O60890 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.76■□□□□ 0.27
OPHN1O60890 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.76■□□□□ 0.27
OPHN1O60890 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.76■□□□□ 0.27
OPHN1O60890 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.76■□□□□ 0.27
OPHN1O60890 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.76■□□□□ 0.27
OPHN1O60890 FAM207CP-201ENST00000443486 507 ntBASIC16.76■□□□□ 0.27
OPHN1O60890 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.76■□□□□ 0.27
OPHN1O60890 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.76■□□□□ 0.27
OPHN1O60890 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.76■□□□□ 0.27
OPHN1O60890 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.76■□□□□ 0.27
OPHN1O60890 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.76■□□□□ 0.27
OPHN1O60890 AL135744.1-201ENST00000565098 629 ntBASIC16.76■□□□□ 0.27
OPHN1O60890 RARRES2P8-201ENST00000566335 367 ntBASIC16.76■□□□□ 0.27
OPHN1O60890 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.76■□□□□ 0.27
OPHN1O60890 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.76■□□□□ 0.27
OPHN1O60890 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.76■□□□□ 0.27
OPHN1O60890 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.76■□□□□ 0.27
OPHN1O60890 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
OPHN1O60890 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
OPHN1O60890 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.76■□□□□ 0.27
OPHN1O60890 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 AKAP8P1-201ENST00000434743 1349 ntBASIC16.75■□□□□ 0.27
OPHN1O60890 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
OPHN1O60890 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.75■□□□□ 0.27
OPHN1O60890 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.75■□□□□ 0.27
OPHN1O60890 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.75■□□□□ 0.27
OPHN1O60890 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.75■□□□□ 0.27
OPHN1O60890 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
OPHN1O60890 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.75■□□□□ 0.27
OPHN1O60890 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.75■□□□□ 0.27
OPHN1O60890 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.75■□□□□ 0.27
OPHN1O60890 FAM58DP-201ENST00000428076 619 ntBASIC16.75■□□□□ 0.27
OPHN1O60890 RBPMS2P1-201ENST00000437762 623 ntBASIC16.75■□□□□ 0.27
OPHN1O60890 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.75■□□□□ 0.27
OPHN1O60890 AC093724.1-201ENST00000448659 1027 ntBASIC16.75■□□□□ 0.27
OPHN1O60890 AL512638.1-201ENST00000457493 794 ntBASIC16.75■□□□□ 0.27
OPHN1O60890 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 IGHV3-62-201ENST00000520057 340 ntBASIC16.75■□□□□ 0.27
OPHN1O60890 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
OPHN1O60890 AC243562.1-201ENST00000560672 389 ntBASIC16.75■□□□□ 0.27
OPHN1O60890 AC140878.1-201ENST00000565277 250 ntBASIC16.75■□□□□ 0.27
OPHN1O60890 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.75■□□□□ 0.27
OPHN1O60890 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.75■□□□□ 0.27
OPHN1O60890 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.75■□□□□ 0.27
OPHN1O60890 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.75■□□□□ 0.27
OPHN1O60890 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.75■□□□□ 0.27
OPHN1O60890 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
OPHN1O60890 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
OPHN1O60890 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
OPHN1O60890 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms