Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GFRA3O60609 AC138028.4-201ENST00000564984 1845 ntBASIC15.29■□□□□ 0.04
GFRA3O60609 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.29■□□□□ 0.04
GFRA3O60609 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.28■□□□□ 0.04
GFRA3O60609 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
GFRA3O60609 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 AC026471.1-201ENST00000564629 3026 ntBASIC15.28■□□□□ 0.04
GFRA3O60609 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 AC016396.2-201ENST00000562575 1417 ntBASIC15.28■□□□□ 0.04
GFRA3O60609 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GFRA3O60609 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 AL354877.1-201ENST00000424412 413 ntBASIC15.28■□□□□ 0.04
GFRA3O60609 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC15.28■□□□□ 0.04
GFRA3O60609 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.28■□□□□ 0.04
GFRA3O60609 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.28■□□□□ 0.04
GFRA3O60609 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.28■□□□□ 0.04
GFRA3O60609 AC006518.1-201ENST00000541449 943 ntBASIC15.28■□□□□ 0.04
GFRA3O60609 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
GFRA3O60609 RN7SL163P-201ENST00000583100 276 ntBASIC15.28■□□□□ 0.04
GFRA3O60609 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GFRA3O60609 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GFRA3O60609 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.28■□□□□ 0.04
GFRA3O60609 AC242376.2-201ENST00000619355 883 ntBASIC15.28■□□□□ 0.04
GFRA3O60609 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 U82695.1-201ENST00000635752 1889 ntBASIC15.28■□□□□ 0.04
GFRA3O60609 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GFRA3O60609 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GFRA3O60609 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
GFRA3O60609 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GFRA3O60609 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.27■□□□□ 0.04
GFRA3O60609 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.27■□□□□ 0.04
GFRA3O60609 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GFRA3O60609 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.27■□□□□ 0.04
GFRA3O60609 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 AL691432.1-201ENST00000596308 1422 ntBASIC15.27■□□□□ 0.04
GFRA3O60609 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.27■□□□□ 0.04
GFRA3O60609 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GFRA3O60609 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.27■□□□□ 0.04
GFRA3O60609 AP000356.3-201ENST00000382243 753 ntBASIC15.27■□□□□ 0.04
GFRA3O60609 AL133267.1-201ENST00000398220 340 ntBASIC15.27■□□□□ 0.04
GFRA3O60609 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.27■□□□□ 0.04
GFRA3O60609 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.27■□□□□ 0.04
GFRA3O60609 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
GFRA3O60609 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GFRA3O60609 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.27■□□□□ 0.04
GFRA3O60609 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.27■□□□□ 0.04
GFRA3O60609 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.27■□□□□ 0.04
GFRA3O60609 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.27■□□□□ 0.04
GFRA3O60609 RN7SL713P-201ENST00000582127 302 ntBASIC15.27■□□□□ 0.04
GFRA3O60609 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.27■□□□□ 0.04
GFRA3O60609 AC133963.1-201ENST00000504166 1679 ntBASIC15.27■□□□□ 0.03
GFRA3O60609 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.27■□□□□ 0.03
GFRA3O60609 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFRA3O60609 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.27■□□□□ 0.03
GFRA3O60609 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFRA3O60609 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFRA3O60609 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFRA3O60609 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GFRA3O60609 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms