Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC093726.1-201ENST00000608064 963 ntBASIC15.86■□□□□ 0.13
PCDHGA12O60330 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA12O60330 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA12O60330 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 ELK1P1-201ENST00000485699 580 ntBASIC15.85■□□□□ 0.13
PCDHGA12O60330 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 AC023310.3-201ENST00000557027 670 ntBASIC15.85■□□□□ 0.13
PCDHGA12O60330 AC100756.1-201ENST00000562736 682 ntBASIC15.85■□□□□ 0.13
PCDHGA12O60330 AC138749.3-201ENST00000567691 622 ntBASIC15.85■□□□□ 0.13
PCDHGA12O60330 AC092337.1-201ENST00000568699 1129 ntBASIC15.85■□□□□ 0.13
PCDHGA12O60330 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 AC116165.1-201ENST00000611806 668 ntBASIC15.85■□□□□ 0.13
PCDHGA12O60330 PKD1P5-201ENST00000532415 10291 ntBASIC15.85■□□□□ 0.13
PCDHGA12O60330 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 AC022188.1-201ENST00000620960 1664 ntBASIC15.85■□□□□ 0.13
PCDHGA12O60330 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA12O60330 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA12O60330 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 AL109936.8-201ENST00000641772 604 ntBASIC15.84■□□□□ 0.13
PCDHGA12O60330 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms