Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
DUX1O43812 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
DUX1O43812 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.24■□□□□ 0.03
DUX1O43812 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
DUX1O43812 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
DUX1O43812 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
DUX1O43812 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
DUX1O43812 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
DUX1O43812 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 AC079776.1-201ENST00000401540 1152 ntBASIC15.23■□□□□ 0.03
DUX1O43812 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.23■□□□□ 0.03
DUX1O43812 ACA64.2-201ENST00000459014 129 ntBASIC15.23■□□□□ 0.03
DUX1O43812 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.23■□□□□ 0.03
DUX1O43812 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.23■□□□□ 0.03
DUX1O43812 KRT17P8-201ENST00000540749 863 ntBASIC15.23■□□□□ 0.03
DUX1O43812 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.23■□□□□ 0.03
DUX1O43812 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.23■□□□□ 0.03
DUX1O43812 AC133539.2-201ENST00000604757 467 ntBASIC15.23■□□□□ 0.03
DUX1O43812 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
DUX1O43812 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
DUX1O43812 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.23■□□□□ 0.03
DUX1O43812 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
DUX1O43812 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX1O43812 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
DUX1O43812 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX1O43812 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX1O43812 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX1O43812 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
DUX1O43812 MIR1909-201ENST00000411312 80 ntBASIC15.22■□□□□ 0.03
DUX1O43812 AC112492.5-201ENST00000421897 457 ntBASIC15.22■□□□□ 0.03
DUX1O43812 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.22■□□□□ 0.03
DUX1O43812 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX1O43812 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.22■□□□□ 0.03
DUX1O43812 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.22■□□□□ 0.03
DUX1O43812 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.22■□□□□ 0.03
DUX1O43812 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
DUX1O43812 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.22■□□□□ 0.03
DUX1O43812 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
DUX1O43812 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.22■□□□□ 0.03
DUX1O43812 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX1O43812 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX1O43812 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX1O43812 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX1O43812 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
DUX1O43812 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
DUX1O43812 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.22■□□□□ 0.03
DUX1O43812 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX1O43812 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX1O43812 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms