Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
MSH5O43196 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.37■■□□□ 1.17
MSH5O43196 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
MSH5O43196 AC024909.3-201ENST00000611513 2257 ntBASIC22.37■■□□□ 1.17
MSH5O43196 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MSH5O43196 BCL2-203ENST00000589955 5011 ntBASIC22.37■■□□□ 1.17
MSH5O43196 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
MSH5O43196 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC22.37■■□□□ 1.17
MSH5O43196 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MSH5O43196 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
MSH5O43196 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC22.36■■□□□ 1.17
MSH5O43196 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
MSH5O43196 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.36■■□□□ 1.17
MSH5O43196 PTCHD3P3-201ENST00000403073 906 ntBASIC22.36■■□□□ 1.17
MSH5O43196 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC22.36■■□□□ 1.17
MSH5O43196 BCAS2P2-201ENST00000425064 674 ntBASIC22.36■■□□□ 1.17
MSH5O43196 RHOQP3-201ENST00000437982 621 ntBASIC22.36■■□□□ 1.17
MSH5O43196 KATNBL1P3-201ENST00000443475 909 ntBASIC22.36■■□□□ 1.17
MSH5O43196 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.36■■□□□ 1.17
MSH5O43196 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC22.36■■□□□ 1.17
MSH5O43196 AC009800.1-201ENST00000511357 1006 ntBASIC22.36■■□□□ 1.17
MSH5O43196 Y_RNA.655-201ENST00000515919 96 ntBASIC22.36■■□□□ 1.17
MSH5O43196 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC22.36■■□□□ 1.17
MSH5O43196 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC22.36■■□□□ 1.17
MSH5O43196 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.36■■□□□ 1.17
MSH5O43196 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC22.36■■□□□ 1.17
MSH5O43196 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC22.36■■□□□ 1.17
MSH5O43196 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC22.36■■□□□ 1.17
MSH5O43196 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC22.36■■□□□ 1.17
MSH5O43196 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC22.36■■□□□ 1.17
MSH5O43196 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC22.36■■□□□ 1.17
MSH5O43196 AC133794.1-201ENST00000602731 914 ntBASIC22.36■■□□□ 1.17
MSH5O43196 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.36■■□□□ 1.17
MSH5O43196 AC022558.3-201ENST00000616598 688 ntBASIC22.36■■□□□ 1.17
MSH5O43196 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 AJ011932.1-201ENST00000621707 465 ntBASIC22.36■■□□□ 1.17
MSH5O43196 AL160394.1-201ENST00000624765 724 ntBASIC22.36■■□□□ 1.17
MSH5O43196 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
MSH5O43196 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
MSH5O43196 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
MSH5O43196 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC22.36■■□□□ 1.17
MSH5O43196 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
MSH5O43196 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
MSH5O43196 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
MSH5O43196 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC22.35■■□□□ 1.17
MSH5O43196 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC22.35■■□□□ 1.17
MSH5O43196 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
MSH5O43196 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
MSH5O43196 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
MSH5O43196 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.35■■□□□ 1.17
MSH5O43196 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.35■■□□□ 1.17
MSH5O43196 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.35■■□□□ 1.17
MSH5O43196 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC22.35■■□□□ 1.17
MSH5O43196 MTCO2P20-201ENST00000437339 673 ntBASIC22.35■■□□□ 1.17
MSH5O43196 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC22.35■■□□□ 1.17
MSH5O43196 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.35■■□□□ 1.17
MSH5O43196 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC22.35■■□□□ 1.17
MSH5O43196 AC125611.1-201ENST00000549563 229 ntBASIC22.35■■□□□ 1.17
MSH5O43196 RIN3-211ENST00000557762 517 ntTSL 3 BASIC22.35■■□□□ 1.17
MSH5O43196 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.35■■□□□ 1.17
MSH5O43196 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.35■■□□□ 1.17
MSH5O43196 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC22.35■■□□□ 1.17
MSH5O43196 AC022145.2-201ENST00000598203 171 ntBASIC22.35■■□□□ 1.17
MSH5O43196 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC22.35■■□□□ 1.17
MSH5O43196 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC22.35■■□□□ 1.17
MSH5O43196 Z92544.3-201ENST00000624747 417 ntBASIC22.35■■□□□ 1.17
MSH5O43196 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC22.35■■□□□ 1.17
MSH5O43196 AL805961.1-202ENST00000641562 540 ntBASIC22.35■■□□□ 1.17
MSH5O43196 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC22.35■■□□□ 1.17
MSH5O43196 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
MSH5O43196 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
MSH5O43196 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms